Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0659 |
Symbol | |
ID | 4923482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 749321 |
End bp | 750751 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640162192 |
Product | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase |
Protein accession | YP_001092790 |
Protein GI | 127511593 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02198] rfaE bifunctional protein, domain I [TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.034689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTT CTCTGCCAGC TTTCGAAAAA GCAAACGTTC TGGTCGTCGG TGATGTGATG TTAGACAGAT ACTGGAGCGG TCCAACGGGG CGCATTTCGC CCGAGGCACC TGTGCCCGTG GTACGAGTGA ATCAAATCGA AGACAGACCC GGCGGGGCGG CCAACGTTGC CTTGAATATC GCCACCCTGG GCGGTCAGGT GAGCCTAGCG GGCATAGTGG GTGAAGATGA AACCGCAGCG GCCCTGACCC AGGGCATAGA GGCGCTTGGC GTCGTGCCTA AGTGGCACAC TGTGGCTGAG CTTCCCACCA TCACTAAGCT CAGGGTGATG TCGCGTAATC AGCAGCTGAT TCGCCTCGAT TTTGAGGAGG CCTATCCGGC CGAGCAGAGC CTGGCACTGC TGGCGAGCGC CGAGAAAGAG CTGGATAAAG TGGCTGTGGT AGTGCTGTCC GATTACGCCA AGGGCGCCAT CGATAAGCCC GAGGCTTTCA TCGCCAAGGC CAAGGCCAAA GGGGTCAAGG TGCTGGTGGA TCCTAAGGGC AGCGACTTTT CCCGTTATCG CGGCGCGACC CTGCTGACGC CTAACATGAG CGAGTTCGAA CAGGTGGTCG GTAAGGTTGC CGACGAGGCG GATCTGGTGA CTAAAGCCAA GGAACTCCTC AAAGAGTTCG ACTTCGAGGC CCTGCTGGTG ACGCGCTCCG AGAAGGGGAT GACGCTGATC ACCGCCGATG CCCCCGAGCT GCATATTCCA ACCGTTGCCC ACGAAGTCTA TGACGTGACC GGCGCCGGTG ACACGGTGAT CTCGGCCCTG GCCACCTCGC TGGCGGTGGG CTGTGAGCTG CCAGTGGCCT GCGCCCTGGC CAACACGGCC GCGGGCATAG TCGTCGGCAA GCTGGGCACC TCTACCGTGA GCCGAATCGA GCTGATCGCC GCCCTGAACC TGAGCCATGG CGAGAGCGGC TACGGGGTGG TCAGCGAAGA TCAACTGGCC TACGCCCTGG AGCAGGCCAA GCTGAAGGGC GAGCGCGTGG TGATGACCAA CGGCTGTTTC GACATTCTCC ATGCCGGCCA TGTGAGTTAC CTGCAACAGG CGAGGGCGCT GGGTGACAGG CTTATCGTGG CGGTTAACGA TGACGACTCG GTGAAGCGTC TCAAGGGCGA TGGCCGTCCG GTTAACAAGC TGGATCGCCG TATGGCCGTA CTGGCGGGGC TGGCCTCGGT CGACTGGGTG GTGCCTTTTA GTGAAGACAC GCCGCAGCGC ATCATCTCCA GACTGCTACC CAATAAGCTG GTGAAGGGCG GCGACTATAA TGTCGAGGAT ATCGCCGGTG GCAAAGAGGT GATCGCGGCT GGTGGCAGCG TCGAGGTGCT GGGCTTCGAA GATGGCGTCT CTACTACGGC CATCATAGAA AACATCATGG CTAAGCAGTG A
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Protein sequence | MKISLPAFEK ANVLVVGDVM LDRYWSGPTG RISPEAPVPV VRVNQIEDRP GGAANVALNI ATLGGQVSLA GIVGEDETAA ALTQGIEALG VVPKWHTVAE LPTITKLRVM SRNQQLIRLD FEEAYPAEQS LALLASAEKE LDKVAVVVLS DYAKGAIDKP EAFIAKAKAK GVKVLVDPKG SDFSRYRGAT LLTPNMSEFE QVVGKVADEA DLVTKAKELL KEFDFEALLV TRSEKGMTLI TADAPELHIP TVAHEVYDVT GAGDTVISAL ATSLAVGCEL PVACALANTA AGIVVGKLGT STVSRIELIA ALNLSHGESG YGVVSEDQLA YALEQAKLKG ERVVMTNGCF DILHAGHVSY LQQARALGDR LIVAVNDDDS VKRLKGDGRP VNKLDRRMAV LAGLASVDWV VPFSEDTPQR IISRLLPNKL VKGGDYNVED IAGGKEVIAA GGSVEVLGFE DGVSTTAIIE NIMAKQ
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