| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0658 |
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| Symbol | |
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| ID | 4923145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 748289 |
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| End bp | 749215 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162191 |
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| Product | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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| Protein accession | YP_001092789 |
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| Protein GI | 127511592 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0642773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTCGAAA ACGCTCAATT CTCCGCTCAA TTTTTCCATC CCAAGTATTG GCTCATCTGG
TTAGGTGTCG GCTTTATGCG TCTGACCCAG CTATTGCCCC TGCGAGCCCA GATGAAATTG
GGACAAGGCA TAGGCCGCCT GGCCATGGCG ATAGCCGGCA GTCGCGTCAA TACCGCCAAG
TGCAACATAG CACTCTGTTT CCCCGAGATG AGCCAGGCCG AGCAGCAGCA ACTCTTGACC
CGCAACTTCG AAGAGACGGG CAAGGCGATA TTCGACATCG CCAACGCCTG GTGGTGGAGT
GACGAGCGCA TTCAGCGCCA CATGACCATT AAAGGCCGCG AGCATGTAGA GCAGACCCTG
GCCGCCGGAC AGGGAGTGAT CCTCTTCGCC GTACACTGTC TGCCGCTGGA GATGGGCGCA
CGCATATTCG GCCAGTTTCA GCCGGGCATA GGCGTCTACC GCCCCCACAA TAATCCGCTG
ATGGAATACC TTCAGGTTAA GGGGCGTCTG CGCTCCAACA AAGGGCTGGT TCCCAAGCGG
GATCTCAGAC AGATGGTGCG CAGCCTGCGC AATCCCGATG TGATCTGGTA TACGGCGGAC
CAAGATTTCG GCCGTTCAAG CGCCGTCTTT ATCCCCTTCT TCGCCGTGCC TGAGGCCGCG
ACTATCACGG GCGCCACCAC CCTAGCCAAA CTGGGCAAGG CCAAGGTGCT GCCCTTCATT
GTGGTGCGCA ATGAAGATGA CAAGGGTTAC ACCATAGAGA TACAAGCGCC GCTGGAAGAC
TTCCCCGGCG AGAACGAGCT GGAAGATGCC AAGCGGGGTA ACCGCATCAT AGAAGAGATC
ATCGAACGTA GCCCGGCGCA ATACATGTGG CTGCATAGAC GCTTCAAGAC CCGTCCCAAT
AAGGATGACC CGTCGCTCTA TCGCTAG
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| Protein sequence | MVENAQFSAQ FFHPKYWLIW LGVGFMRLTQ LLPLRAQMKL GQGIGRLAMA IAGSRVNTAK
CNIALCFPEM SQAEQQQLLT RNFEETGKAI FDIANAWWWS DERIQRHMTI KGREHVEQTL
AAGQGVILFA VHCLPLEMGA RIFGQFQPGI GVYRPHNNPL MEYLQVKGRL RSNKGLVPKR
DLRQMVRSLR NPDVIWYTAD QDFGRSSAVF IPFFAVPEAA TITGATTLAK LGKAKVLPFI
VVRNEDDKGY TIEIQAPLED FPGENELEDA KRGNRIIEEI IERSPAQYMW LHRRFKTRPN
KDDPSLYR
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