| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0618 |
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| Symbol | |
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| ID | 4922577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 703288 |
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| End bp | 703968 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640162151 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092749 |
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| Protein GI | 127511552 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
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| TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.357102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGTAA ACTCTATTTT GGGCGTGTTT GCAAAATCGC CAATTAAACC ATTACAAGAT
CATATCGACA AGGTGCACGA TTGTGCCTCG ATCCTTGTAC CATTTTTTGA CGCTACTGTC
GCAGGTGACT GGGACAAAGC GGTTCAACTC CGTAAACAAA TCAGCCAATC AGAACGTGAA
GCAGACGAAC TCAAGCGTGA GATCCGCTTA ACGCTTCCCG GCGGCCTGTT TATGCCAGTT
GAAAGAACAG ACTTACTGGA GCTACTTACC CAGCAAGATA AAATCGCCAA CAAGGCGAAA
GACATTTCAG GTCGCGTTAT CGGCCGTCAG CTACTTGTCC CAGAAGCAAT TCAAGATACC
TTTAATGCCT ACCTGGCACG CTGTCTCGAT GCAGTGGCTC AGGCTAAGCA AGCCATTAAC
GAGCTCGATG ACCTGCTAGA AACAGGTTTC AGAGGCCGTG AGGTCGATCT TGTCGCTAAA
ATGATCGTGG AACTCGACAA AATTGAAGAG GACACCGACG ATCTACAAAT CAAAATCCGT
CGTCAGTTGT TTAGCATCGA GAATCAGCTA AACCCTGTGG ATGTGATGTT CCTCTATAAG
ATAATTGAGT GGGTTGGAGA CTTGGCAGAC CTTGCCGAGC GTGTCGGTTC CCGCCTAGAG
CTAATGTTAG CTCGCGTCTA A
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| Protein sequence | MPVNSILGVF AKSPIKPLQD HIDKVHDCAS ILVPFFDATV AGDWDKAVQL RKQISQSERE
ADELKREIRL TLPGGLFMPV ERTDLLELLT QQDKIANKAK DISGRVIGRQ LLVPEAIQDT
FNAYLARCLD AVAQAKQAIN ELDDLLETGF RGREVDLVAK MIVELDKIEE DTDDLQIKIR
RQLFSIENQL NPVDVMFLYK IIEWVGDLAD LAERVGSRLE LMLARV
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