| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0596 |
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| Symbol | |
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| ID | 4923963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 672749 |
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| End bp | 674671 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162129 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001092727 |
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| Protein GI | 127511530 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.270432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAC TCAACATCCG TCGTAAAGTC GTACTCGCCA CCCTGGCCTC TGTCGTGTTA
TCCATCTTTT TGATCAGCCT CTATGCAATG TCCAATAGTC GGGAGATCAT TCTCGACAGC
ACCCTAAACC GAGAATTACC AGCGGTTTTA GGTGAGGTCG CTAACGATAT TGACGCCCAG
TTATTGATGC CGATTACAGT TTCCAAGGTG ATGGCCAATA ACCTCGAATA TCAGGCCATG
ATACGTCAAG GTGAACCCGA AGCTAGCCAG GCGACACTTA TAGCCTCCCT CGCCAATATT
CGTCAGCGAT TTGGCGCCAT TACCGCCTTT CTGGTCTCTA ATACCACGGG ACGCTACTTC
ACCCATGAAG GACTCTTTAA AACCGTCTCT CCAAGTGATG ACAGAGATGC CTGGTTTTAT
CGCTTCTTAG GTAGCGGTAA AGATTACGAT TTGAGTATCG ATGTCGACGA TCTCAACCAA
ACGCCCACCC TGTTTATCAA CTATCTAGTA CAGATAGAGG GTAAGCCGAG CGGTGTAGCG
GGCGTGGGGC TGTCACTCAA CAGTCTGGCC GACAACATCA AACAATATAA GATTGGTGAA
CAGGGGCGCG TCTATCTTAC CGACGGCAAT GGCCAGATAA AGATCCACGG CCAAAGCCAG
TTTGCCGGCA AGCAACTGAG CGCCTTGGGC ATCAAAGATC CGCAAGCATT GCTGTCTCAG
CAGACCTTTG CCACCTCAGA ATATGATAAC AATGGTGTCG ACACCCTAGT CGCCAGTCGC
TACATTCCCT CAATCGGCTG GTATCTTATT GCCGAAGTCC CACAAGACGA GCTGTTTGGC
GCCATCAATA AAGCCAGTTG GCAACTGGCA CTGATGGGGC TGATACTGGC CGCCATTATC
ATGTTCACCA GCGCCTGGCT GATCAACCGC CTTATCTCTC CCTTTGGCGA GCTTGCAGAT
ATGTTGAAAA GCATTGGTGA GGGAGAGGGC GACCTCTCAC TGCGACTGGA CGACAGTCGT
CAGGATGAGA CCGGCAGCAT GGCTGCCAGC TATAACCAGT TTGTCACCTA TCTCAGTAAG
ACACTGCAAA GCGTATCGGC AACAGCCAAC GATCTGTTTC AGGCGGTCGA GCGGATCGAC
AATCAAGCTA AACATATGGA ACATGAGATC AACGATCAGG TCAGCAAGAT AGAGCAAGTA
GCAACCGCCA TTCACGAAAT GGGCATGACA GCCCAAGAGA TCGCCAGCAG CGCCAACAAT
GCTGCCGAGA ATGCCCAGGT CGCCGACCAA TCGGTTAATC AGGGCAATCA GTCGGTACAA
AATACCATAG CCTCAGTAGC AAGCATGAGT GAGCAGCTAC TGACCACCAG CGAGACGGTA
TCGCAACTTG CAGAAGATGC CAGCTCCATC GACACTGTGC TTGAGGTGAT CCGCGGCGTG
TCGGAACAGA CTAATTTGCT GGCACTGAAC GCAGCAATCG AGGCTGCACG AGCAGGCGAA
CAGGGCCGCG GCTTTGCGGT AGTGGCTGAT GAAGTCCGCA CACTGGCTTC TCGCAGCCAT
GCCTCTACCG AGGATATTCG TCACATCATA GAGAAGCTAC AGGCGAAAAC GACCGAGGTG
GTCAACGCCA TCGGCCAGAG TACAAACCAG AGTCAACAGA GCCAACAGGA AGCCAGCCTC
TCAGGCGAAC ACCTGCATAG CATCGCCGAA AACATTCAGG CCATGAGCGA GATGAGTATG
CAGATCGCCA CGGCGACGGA AGAGCAGTCC AACGTTGTTG GTGAAATCAA TCCTCATGTC
ACAGCTATTG CCGATATCTC ACGCAGCAGC AGTGACGTGG TTCGCCAGAC TTCGCTCGAT
TGTAGCGATC TAAGAGAGAT GGCGGTACAA CTCAACGAAC TGGTGTCTCG CTTTAAGTTT
TAA
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| Protein sequence | MLKLNIRRKV VLATLASVVL SIFLISLYAM SNSREIILDS TLNRELPAVL GEVANDIDAQ
LLMPITVSKV MANNLEYQAM IRQGEPEASQ ATLIASLANI RQRFGAITAF LVSNTTGRYF
THEGLFKTVS PSDDRDAWFY RFLGSGKDYD LSIDVDDLNQ TPTLFINYLV QIEGKPSGVA
GVGLSLNSLA DNIKQYKIGE QGRVYLTDGN GQIKIHGQSQ FAGKQLSALG IKDPQALLSQ
QTFATSEYDN NGVDTLVASR YIPSIGWYLI AEVPQDELFG AINKASWQLA LMGLILAAII
MFTSAWLINR LISPFGELAD MLKSIGEGEG DLSLRLDDSR QDETGSMAAS YNQFVTYLSK
TLQSVSATAN DLFQAVERID NQAKHMEHEI NDQVSKIEQV ATAIHEMGMT AQEIASSANN
AAENAQVADQ SVNQGNQSVQ NTIASVASMS EQLLTTSETV SQLAEDASSI DTVLEVIRGV
SEQTNLLALN AAIEAARAGE QGRGFAVVAD EVRTLASRSH ASTEDIRHII EKLQAKTTEV
VNAIGQSTNQ SQQSQQEASL SGEHLHSIAE NIQAMSEMSM QIATATEEQS NVVGEINPHV
TAIADISRSS SDVVRQTSLD CSDLREMAVQ LNELVSRFKF
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