| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0589 |
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| Symbol | |
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| ID | 4921662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 666048 |
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| End bp | 667031 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162122 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001092720 |
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| Protein GI | 127511523 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.532297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC GTACCTTCAC GCCCCCCTGG TGGGCAAGAA ATCCCCATGT GCAAACTATC
CTGCCTGTGC TGACCAAGGT GAACAAGCCC GCCCTCACTC GCCAGCGCCT GGAGCTGGAA
GACGGCGACT TTATCGATCT CGACTGGCTG GCTAAACCCA CACAGACGGC ACCCACACAG
ATTGAGCCTA TAGTCGTGCT GGTGCATGGG CTGGAAGGCA GCGCCGACTC TCACTATGCC
AGACGTCTGC TCACTCTGCT GGACGACCAC AAGGTTGCCG CCCTGGTGCA TCATCATCGC
AGCTGTTCTG GCGTGACCAA TCGTCTCGCC CGCAGCTATC ACAGCGGCGA TACGCAAGAT
CTGCACACCA CTCTCAGCCA GCTGCGAAGG GACTATCCCG ACTCGCCGCT GCTGGCGGTG
GGTTACAGCC TGGGCGGTAA TGTGCTGACC AAATATATGG GCGAGCATGG CAGTGACAGC
CTGGTGGATC GCGCCGTGGT GATCTCGGCG CCGCTGCAGC TGGGCGCCTG CGCCAAGCGC
CTCAGACACG GCTTCTCCAA GGTCTACCAG AGCTATCTCA TCAAGCAGCT ACAACAGAAG
GTGCGCGACA AGCTGGCCCT GCCAGATCTG AGTGCCCAGA TGCCGGTGAC CCAGGCCGAG
GTGGAGAGCC TAACCACCTT TCATCTGTTC GATGACAGGG TCACCGCGCC GCTGCACGGC
TTCGATGGCG TCGAAGACTA TTACCGGCGC GCTAGTGGTC TGCCCTACCT GAGTCAGGTG
GCTAAGCCGA CCCTGGTGAT CCACGCCAAG GACGATCCCT TCATGACAGA TGAGGTGATC
CCGACTCAGG AGGCGCTCTC GCCCCAGGTC ACCTATGAGC TGCACCCACA GGGCGGTCAC
GTTGGCTTTA TCGACGGCGG CCATCCCTTC AAACCCAGAT ATTATCTGGA GCAGCGCATC
GTCCATTTTC TGCTGGAGGC TTAA
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| Protein sequence | MTQRTFTPPW WARNPHVQTI LPVLTKVNKP ALTRQRLELE DGDFIDLDWL AKPTQTAPTQ
IEPIVVLVHG LEGSADSHYA RRLLTLLDDH KVAALVHHHR SCSGVTNRLA RSYHSGDTQD
LHTTLSQLRR DYPDSPLLAV GYSLGGNVLT KYMGEHGSDS LVDRAVVISA PLQLGACAKR
LRHGFSKVYQ SYLIKQLQQK VRDKLALPDL SAQMPVTQAE VESLTTFHLF DDRVTAPLHG
FDGVEDYYRR ASGLPYLSQV AKPTLVIHAK DDPFMTDEVI PTQEALSPQV TYELHPQGGH
VGFIDGGHPF KPRYYLEQRI VHFLLEA
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