| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0583 |
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| Symbol | |
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| ID | 4920849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 661411 |
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| End bp | 662085 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162116 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001092714 |
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| Protein GI | 127511517 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0841609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.467543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTGC TGCTGGTTGA AGACAACACC CTACTGGTCG ATGAGCTTGC CAAACAGCTG
AAGCAGGCCG GCTATGTCAC AGATGTCACC GACAGAGCCG CCGAAGCCGA CTACCTGATC
AAAGAAACCC ATTATGATTG TGTCATCCTG GATATCGGCC TGCCCGACGG CAACGGTCTG
CAGCTGCTGG AGACCTGGCG CAACCAGGGC ATAGACACGC CGGTGATCAT GCTCACCGCC
CGCAGCCAGT GGCACGAGAA GGTCGAAGGC TTCAACGCCG GCGCCGACGA TTACCTGGGC
AAGCCCTTCC ACAGCCAGGA GCTGCTGGCG CGCATTCACG CCCTGATCAA TCGTGCCCAC
GGCAAGACCA ACAGCCCCAC CAAGGAGCTG AGCTTCGAGG GAGTCACCCT GGACGAGAGC
CAGCAGAGCG TCACCGTTGG CGAGCAGCAG TTCGAACTCA CCGCCATGGA GTTTCGCCTG
CTGAAGATCT TCCTCATGTC GCCCAAGAAA CTGCTCTCCA AGGCGCAGCT GACCGACAAG
CTGTATCAGT TTGATGACGA GAAGGAGAGT AACGTGGTGG AGGTCTATGT GACCCACCTG
CGTAAGAAGC TGGGTAAGAC GGCCATCGAG ACCCGCAGGG GACAGGGCTA CATCTTCCAC
GGCCTCAAGC CATGA
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| Protein sequence | MKLLLVEDNT LLVDELAKQL KQAGYVTDVT DRAAEADYLI KETHYDCVIL DIGLPDGNGL
QLLETWRNQG IDTPVIMLTA RSQWHEKVEG FNAGADDYLG KPFHSQELLA RIHALINRAH
GKTNSPTKEL SFEGVTLDES QQSVTVGEQQ FELTAMEFRL LKIFLMSPKK LLSKAQLTDK
LYQFDDEKES NVVEVYVTHL RKKLGKTAIE TRRGQGYIFH GLKP
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