Gene Shew_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0430 
Symbol 
ID4921225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp482940 
End bp483212 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content46% 
IMG OID640161959 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001092561 
Protein GI127511364 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.719598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA CTGAACTTGT TGCAAAAATA GCGGAAAGCG CTGAACTCAC TAAAGCTGAA 
GCTGCTCGCG CCTTAAAGTC TTTCGAAGAA ACGGTAGCGG AAGCGATGAA GAACGGCGAA
AAAATCTCTA TTGTAGGTTT TGGTTCTTTC GAGACCACTA GCCGTGCAGC ACGTACAGGC
CGCAACCCAC AGACGGGCAA AGAAATTCAG ATCCCAGCGG CTGTAGTACC TAAGTTTAAA
GCCGGTAAGA CGCTAAAAGA CAGCGTAAAC TAA
 
Protein sequence
MNKTELVAKI AESAELTKAE AARALKSFEE TVAEAMKNGE KISIVGFGSF ETTSRAARTG 
RNPQTGKEIQ IPAAVVPKFK AGKTLKDSVN