| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0410 |
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| Symbol | |
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| ID | 4921934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 462840 |
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| End bp | 464288 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161939 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_001092541 |
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| Protein GI | 127511344 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTT TAACCCAAGT AGAACAGAGC CTCTTGCAAG ACGGATTGTC GCTGGATCAG
TTGCAAGGCT ATATCAATAG CATTCATCAG CATCAGGTGG ACTTTTCCGA TCTCTATTTT
CAGGGCAGTC GCCACGAGTC TTGGGTGTTA GAAGATGGCA TAGTCAAGGA AGGCAGCTTT
CATATCGAGC GCGGTGTGGG CGTGCGTGCC ATCAGCGGCG AGAAGACGGG CTTCGCCTAT
GCCGACGAGA TCACCCCAGC GGCGCTGAGC GCGGCGGTCG AGGCGGCACG CGGCATCTCT
GCGGCGGGCA ATAGCGGCCG TGTCCAGGCA TGGAAGCAGC ACAAGGTGAC GCCTCTGTAT
CAGAGCGCCG ACCCTATCGC GGCCATGGAA GAGGTGAAGA AGATAGCGCT GCTCAAACAG
GCCGATGCCT ACGTGCGCAG CCTGGACCCG CGCATCATAC AGGTGGTGAT CAGCCTGTCG
GGCGTGCATG AAGAGATCTT AGTCGCGGCC AGCGACGGCA CCCTGGCGGC AGATATTCGT
CCCCTGGTAC GTTTCAACTG TAGCGTGGTG CTGGAGCAGG AAGGCAAGCG TGAGCGTGGC
GCCAGCGGTG GCGGTGGACG CCATGATTAT CAAGTGTTTT TCGAGTCGGG CGACGATGGT
CTGCCTAGCT GTTTCGCCTT TGCCCGCGAA GCCGTGCGTC AGGCCTCGGT CAATCTGACC
GCCATAGATG CACCTGCCGG TGAGATGCCT GTGGTACTGG GCGCGGGTTG GCCCGGTGTC
CTGCTGCATG AGGCAGTGGG TCATGGCCTG GAAGGCGACT TCAATCGTAA GGGTAGCAGC
GCCTTTAGCG GCTTGGTGGG CCAACAGGTG GCTTCTAGCC TGGTGACCGT GGTGGACGAT
GGCACCCTGG AGAATCGACG CGGCTCGCTC AGCATAGACG ATGAAGGGGT TCCTACTCAG
AAGACTGTGC TTATCCAAGA CGGCATCCTC AAGGGCTATA TGCAAGACAA GCTCAACGGC
CGCCTGATGG GCCAGGCCTC AACCGGTAAT GGTCGCCGCG AGTCTTATGC CCATCTGCCT
ATGCCGCGCA TGACCAACAC CTATATGGAA GCCGGCGACA GCTCGCCTGA AGATATCATC
AAGTCGGTGG ACAAGGGGAT CTATGCGCCT AACTTCGGCG GCGGTCAGGT CGATATCACC
TCGGGCAAGT TTGTGTTCTC GGCGTCTGAA GCCTATCTCA TCGAGAAGGG CGAGATCACC
CAGGCGATCA AGGGTGCGAC TCTAATTGGT AATGGTCCCG AGGCCATGGG GCAGCTCTCC
ATGGTGGGTA ACGATCTGGC GCTCGATAAG GGTGTCGGTG TCTGTGGCAA AGATGGTCAA
AGTGTGCCCG TGGGCGTGGG CCAGCCTAGC CTGAAACTCG ACCGCTTGAC GGTAGGTGGC
ACGGCGTAA
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| Protein sequence | MPFLTQVEQS LLQDGLSLDQ LQGYINSIHQ HQVDFSDLYF QGSRHESWVL EDGIVKEGSF
HIERGVGVRA ISGEKTGFAY ADEITPAALS AAVEAARGIS AAGNSGRVQA WKQHKVTPLY
QSADPIAAME EVKKIALLKQ ADAYVRSLDP RIIQVVISLS GVHEEILVAA SDGTLAADIR
PLVRFNCSVV LEQEGKRERG ASGGGGRHDY QVFFESGDDG LPSCFAFARE AVRQASVNLT
AIDAPAGEMP VVLGAGWPGV LLHEAVGHGL EGDFNRKGSS AFSGLVGQQV ASSLVTVVDD
GTLENRRGSL SIDDEGVPTQ KTVLIQDGIL KGYMQDKLNG RLMGQASTGN GRRESYAHLP
MPRMTNTYME AGDSSPEDII KSVDKGIYAP NFGGGQVDIT SGKFVFSASE AYLIEKGEIT
QAIKGATLIG NGPEAMGQLS MVGNDLALDK GVGVCGKDGQ SVPVGVGQPS LKLDRLTVGG
TA
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