| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0405 |
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| Symbol | |
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| ID | 4922188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 455056 |
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| End bp | 455544 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161934 |
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| Product | rod shape-determining protein MreD |
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| Protein accession | YP_001092536 |
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| Protein GI | 127511339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2891] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0933678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATGC ATATTCCCCA CGGTCGTTGG GTGGTCTGGT TAAGCTTCCT GCTGGCCATG
TTATTTCAGA TCATGCCGCT GCCCGGCCTG GTAGAGGGCT GGCGCCCCGA CTGGCTGCTG
CTGGTGATGA TCTATTGGGC GATGGCGCTG CCGCACCGCT ACAACATCCT CTCGGCCTGG
GTGCTGGGCG TCTTGTTGGA TATCCTGCTG GGGGCCCACC TCGGCATACG CGCGCTCTCC
ATGTCGCTGG TGATCTATGT GGTGGTACTG CATTTTCAGC GGCTGCGTAA CTTCCCCATG
TGGCAACAGG CACTGATGGT GGCCAGCCTG GTGTGCCTGC ACCATCTGCT GGTGTTCTGG
GTACAGTTTG TGGTGAACGT GGCGAGCTTC GATGTCAGCC TGTTCCTGCC GGCCCTGTCG
AGCCTGATCA TCTGGCCTTG GGTATTTTGG ATGCTGAGAC GCATTCGCCG TATTTATAAA
GTGAGATAA
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| Protein sequence | MSMHIPHGRW VVWLSFLLAM LFQIMPLPGL VEGWRPDWLL LVMIYWAMAL PHRYNILSAW
VLGVLLDILL GAHLGIRALS MSLVIYVVVL HFQRLRNFPM WQQALMVASL VCLHHLLVFW
VQFVVNVASF DVSLFLPALS SLIIWPWVFW MLRRIRRIYK VR
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