| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0381 |
|---|
| Symbol | rpmE |
|---|
| ID | 4923156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 431296 |
|---|
| End bp | 431508 |
|---|
| Gene Length | 213 bp |
|---|
| Protein Length | 70 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640161910 |
|---|
| Product | 50S ribosomal protein L31 |
|---|
| Protein accession | YP_001092512 |
|---|
| Protein GI | 127511315 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0254] Ribosomal protein L31 |
|---|
| TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAG GCATTCATCC TGAATATGCT GAAATCACTG CAACTTGTAC TTGTGGTAAC
GTTATCAAAG TAAACTCAAC TGCAGGTAAG CCACTGCACT TGGACGTATG TGGTGCATGT
CACCCATTCT ACACTGGTAC TCAGAAAGTT ATGGATACCG GTGGACGTAT CGACAAGTTC
AACAAGCGTT TCGGTATGCT TGGCAAGAAG TAA
|
|---|
| Protein sequence | MKPGIHPEYA EITATCTCGN VIKVNSTAGK PLHLDVCGAC HPFYTGTQKV MDTGGRIDKF
NKRFGMLGKK
|
|---|
| |