| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0374 |
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| Symbol | hslU |
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| ID | 4920943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 421123 |
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| End bp | 422448 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161903 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001092505 |
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| Protein GI | 127511308 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.191094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGA TGACTCCACG CGAGATTGTT CACGAGCTGG ACAGCCACAT CATAGGCCAG
CAAAACGCCA AGCGTTCGGT CGCTATCGCC CTGCGTAACC GCTGGCGTCG TATGCAGCTA
GATGCCGCGC TGCGCCAAGA AGTCACCCCA AAAAACATTC TGATGATAGG CCCTACGGGT
GTAGGTAAGA CAGAGATCGC CCGCCGTCTG GCCAAGCTGG CCAAGGCGCC TTTCATCAAG
GTCGAAGCCA CTAAGTTTAC CGAAGTCGGT TACGTGGGTA AGGAGGTCGA GCAGATCATC
CGTGACCTCA CCGACGCCGC CGTCAAGCTG ACCCGCGAAG AGCAGATGGC CAAGTGTAAG
TTCAGAGCCG AAGAAGCGGC CGAAGAGCGT ATTCTCGATG CCCTACTACC TAAACCCAAG
GAAGACTGGG ACACTGAGAA GAAAGATGAC ACCGGCACCC GTCAGGTGTT TCGCAAGAAG
CTACGCGAAG GCCAGCTGGA CGACAAAGAG ATCGAGATCG ATATCGCCGC GCCTCAGGTG
GGCATAGAGA TCATGTCGCC ACCCGGCATG GAAGAGATGA CCAGCCAGCT GCAGAGCATG
TTCCAAAACA TGGGCCCTGG CGCCAGCAAG CGTCGTAAGA TGACCATCAA GGAAGCCTAT
AAGCTATTGA TCGAAGAGGA AGCCGCCAAG CTGGTGAATC CTGACGATCT TAAAGAGCAG
GCGATCGAAC TGGTCGAGCA ACACGGCATC GTCTTCCTAG ATGAGATCGA CAAGATCTGT
AAGCGTGGCG ACACCTCGGG GCCAGACGTC TCTCGCGAAG GGGTTCAACG CGACTTACTG
CCTCTGGTGG AAGGCTGCAC GGTCAACACC AAGCACGGCA TGGTCAAGAC AGACCATATC
CTGTTTATCG CCTCGGGCGC GTTCCAGATG TCTAAGCCAT CGGATCTCAT CCCCGAGCTG
CAGGGCCGTC TACCGATCCG CGTCGAGCTG GAAGCCCTGT CTGCCAACGA CTTTAAGCGC
ATTCTCACCG AGCCCCATGC CTCGCTCACC GAGCAGTATG TGGCATTGAT GGCCACCGAA
GGCGTTAAGG TCGAGTTTAG CGAGTCGGGT ATCGAGCGCA TCGCTCAGGC TGCCTGGCAG
GTCAACGAGC GCACCGAAAA TATCGGTGCC CGCCGCCTGC ATACCGTGAT GGAGCGCCTG
ATGGAAGATC TCTCCTTCGA GGCCTCGGAC AAGTCAGGCA GCACGACTGT GATCGATGCC
GACTATGTTA ACGCTCACCT GGAGAACTTG GTACAGGACG AAGATCTCAG CCGCTTCATC
CTGTAA
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| Protein sequence | MSEMTPREIV HELDSHIIGQ QNAKRSVAIA LRNRWRRMQL DAALRQEVTP KNILMIGPTG
VGKTEIARRL AKLAKAPFIK VEATKFTEVG YVGKEVEQII RDLTDAAVKL TREEQMAKCK
FRAEEAAEER ILDALLPKPK EDWDTEKKDD TGTRQVFRKK LREGQLDDKE IEIDIAAPQV
GIEIMSPPGM EEMTSQLQSM FQNMGPGASK RRKMTIKEAY KLLIEEEAAK LVNPDDLKEQ
AIELVEQHGI VFLDEIDKIC KRGDTSGPDV SREGVQRDLL PLVEGCTVNT KHGMVKTDHI
LFIASGAFQM SKPSDLIPEL QGRLPIRVEL EALSANDFKR ILTEPHASLT EQYVALMATE
GVKVEFSESG IERIAQAAWQ VNERTENIGA RRLHTVMERL MEDLSFEASD KSGSTTVIDA
DYVNAHLENL VQDEDLSRFI L
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