| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0371 |
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| Symbol | |
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| ID | 4923752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 419234 |
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| End bp | 420100 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640161900 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001092502 |
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| Protein GI | 127511305 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG3449] DNA gyrase inhibitor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAG CAGCGCACCA GGCCTATAGT CAACGAATCC AGACGGTTTG TGACTATATC
GCGAAACATC TGGAGCAGCC CCTGACGCTG GAACAACTGA GCCAGAAGGC GCACTTCTCC
AAGTATCATT TTCATCGCCA GTTTCAGGTG TATACCGGTA TAACCTTAGG TAAATACATC
AGCCTGCTCA GGCTGAAGCG GGCCTCATAC CGATTGGTGT TTCATCCCGA ACTCAAGATC
ACCGACATCG CCCTCGATGC CGGGTTTGAG AACGGCGAAT CCTTCTCGCG AGCCTTTAAG
CAGGTATTTG CCCAGACCCC GACCCAGTTC AGGTTAACGC CTAAGTGGGA GCAATGGAGT
CAACAATATG CCAAGGTGAA CTATACAAGG AGAGAAACTG TGCAGATCAA ACTCACGCAA
AGAGACGATA TCAAGGTCGC CGTGCTGGAA CACCAAGGCA GCCCGGCCGC ACTGAACGAC
TCGATTCAAC AATTTATCAA CTGGCGTAAG CAGAGCGGCG AATCCCCTGT GGCCAGCAGC
CTGACCCTGG GCGTACCCTT TAACGACCCT AACACGGTAG CGCCCGAGGC ATTTCGTTTC
GACATCTGTG GCTCGGTAAC GGCCGAGGTC AAGGCCAACG ACTTTGGAGT GATCACCAAG
ACGATCCCCG GCGGTCGCTG CGCCGTGATC CGCCATCTTG GACCGCACGA TCAGATGGAC
GATAAGATCT ATCAGTTCTA CCGCGACTGG CTGCCCCAGA GCGGCGAGGA GCTGAGGGAC
TTTCCTCTCT ACTTCGAGTA CCACAACTTC TTCCCCGAAG TGGCGGAGCA TGAGCTGGTA
ACAAAGATCT ATTTTTCACT GAAATAG
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| Protein sequence | MNRAAHQAYS QRIQTVCDYI AKHLEQPLTL EQLSQKAHFS KYHFHRQFQV YTGITLGKYI
SLLRLKRASY RLVFHPELKI TDIALDAGFE NGESFSRAFK QVFAQTPTQF RLTPKWEQWS
QQYAKVNYTR RETVQIKLTQ RDDIKVAVLE HQGSPAALND SIQQFINWRK QSGESPVASS
LTLGVPFNDP NTVAPEAFRF DICGSVTAEV KANDFGVITK TIPGGRCAVI RHLGPHDQMD
DKIYQFYRDW LPQSGEELRD FPLYFEYHNF FPEVAEHELV TKIYFSLK
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