| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0364 |
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| Symbol | |
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| ID | 4922516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 412388 |
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| End bp | 412879 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640161892 |
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| Product | MshA, mannose-sensitive haemaglutinin |
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| Protein accession | YP_001092495 |
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| Protein GI | 127511298 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0735599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA ACGGATTTAC CCTGATTGAA CTAGTCATCA CTGTCATCAT ACTCGGCATT
CTGGCCACCA TTGCCCTGCC ACGTTTCATC AATATCCAGT CCGATGCCCG CATCGCCGCC
CTACAGGGAC TCAAGAGCGA GATGAGCGGC ACCCTGCCCC TGGTGTTTAC CAAGGCGAGT
CTGGAAAACC TGCAGACACA GGCCAGCACA AACATAAGCC TCAACGGCGA TCAGGTAGAG
CTCGCCTATG GCTACCCGGC TGCCGACTCA GCCCACGCCT GGGATCTCTT GCTCGAGGCC
AGCTTTGCCG ATGCCGTGTT CAACGCCGAC GACCCGGCCG ACTGGTACTT TCACAATAAC
AAGGCCGAGC CTTTCATCCG CTTCATGCAC CCAAGCAAGA AGTCCAGTAG CGAGAACTGC
TACCTCAAAT ACACACAGGC CCTGAGTACT ACCCAGGGCC CAAGTTTCGA GATTGTGGAT
TCGGGCTGCT AA
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| Protein sequence | MKRNGFTLIE LVITVIILGI LATIALPRFI NIQSDARIAA LQGLKSEMSG TLPLVFTKAS
LENLQTQAST NISLNGDQVE LAYGYPAADS AHAWDLLLEA SFADAVFNAD DPADWYFHNN
KAEPFIRFMH PSKKSSSENC YLKYTQALST TQGPSFEIVD SGC
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