| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0360 |
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| Symbol | |
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| ID | 4922227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 408711 |
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| End bp | 410192 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161888 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001092491 |
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| Protein GI | 127511294 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.375206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTA AGGATTTACG CAGTTTTATC GATCACCTCG AAGCCAATGG CGAACTTAAG
CGCATCGCCC ACCCTGTCGA TCCCCATCTG GAAATGACGG AGATCGCCGA TCGTGTGCTG
AGAGCCAAGG GTCCGGCGCT GCTGTTTGAA AATCCTGTCG GCAAGACAAT GCCTGTGCTG
GCCAACTTGT TTGGCACCCC AAAACGCGTT GCCATGGCAC TGGGCAAGGA AGATCCCCTC
GCCCTGCGCG ATGTGGGCGA GCTGCTGGCC TTCCTCAAGG AACCTGAGCC GCCACGCGGC
TTTAAAGATG CCATCTCCAA GATTCCTATG TTCAAGCAGG CGCTGAACAT GCCACCCAAG
ACAGTGCGCA ACGCCCCCTG CCAGGAGGTG GTGGTCAGCG GCGATGAGGT GGATCTCACC
AAGCTGCCTA TTCAGCACTG CTGGCCTGGC GACGTGGCCC CGCTGGTGAC CTGGGGACTG
ACCATCACCA AGGGTCCGAG GCAGAAGCGA CAAAACTTAG GTATCTACCG CCAGCAGCTA
CTGGGCAAGA ACAAGCTGAT CATGCGCTGG CTGGATCATC GCGGCGGCGC GCTGGATTTC
AAAGACTTTA AAGAGCAGCA TCCGGGCGAG CGTTACCCGG TTGTGGTGGC GCTGGGCGCC
GACCCCGTAA CCATCTTAGG CGCCGTGACG CCTGTGCCCG ACGCCATGAG CGAGTACGCC
TTTGCCGGCC TGCTTCGGGG CGAGCGCACC GAAGTATGTA AGGCGCTGAG CTGCGATCTC
GAGGTGCCCG CCACCAGCGA GATCATTCTC GAAGGTTATA TCGAACCGGG CGAGATGGCC
GAAGAGGGCC CCTACGGGGA TCACACGGGT TACTACAACG AAACCGACGA GTTCCCCGTC
TTCACAGTGA CCCATGTCAG CCACAGACGC GACGCCATCT ACCACAGCAC CTATACCGGC
AGGCCACCCG ATGAACCCGC CATGCTGGGT GTGGCACTGA ATGAGGTGTT CGTGCCTATC
TTGCGCAAGC AATACCCTGA AATCGTCGAC TTCTATCTGC CGCCCGAAGG CTGCTCCTAT
CGCATGGCGG TGATCTCCAT CCGCAAGCAG TATCCAGGGC ACGCCAAGCG GGTGATGATG
GGCGCCTGGT CCTTCCTGCG CCAGTTCATG TACACCAAGT TCATCATCAT AGTGGATGAG
GATGTCAACT GCCGCGACTG GAACGATGTC ATCTGGGCCA TCACCACCCG GATGGATCCT
AAACGCGATA CCGTCATGAT AGACAACACC CCTATCGACT ACCTGGATTT CGCCTCTCCT
GTGGCCGGAC TCGGCTCCAA GATGGGGATG GATGCCACCA ACAAGTGGGA AGGAGAGACC
GACCGCGAGT GGGGCACCCC CATCGTCATG GACGAAGCGG TCAAACAGAG AATCGATGCG
ATCTGGGATG ACCTGGGCAT AGACGATGCT CCGACACTAT AA
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| Protein sequence | MSFKDLRSFI DHLEANGELK RIAHPVDPHL EMTEIADRVL RAKGPALLFE NPVGKTMPVL
ANLFGTPKRV AMALGKEDPL ALRDVGELLA FLKEPEPPRG FKDAISKIPM FKQALNMPPK
TVRNAPCQEV VVSGDEVDLT KLPIQHCWPG DVAPLVTWGL TITKGPRQKR QNLGIYRQQL
LGKNKLIMRW LDHRGGALDF KDFKEQHPGE RYPVVVALGA DPVTILGAVT PVPDAMSEYA
FAGLLRGERT EVCKALSCDL EVPATSEIIL EGYIEPGEMA EEGPYGDHTG YYNETDEFPV
FTVTHVSHRR DAIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIVD FYLPPEGCSY
RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIIIVDE DVNCRDWNDV IWAITTRMDP
KRDTVMIDNT PIDYLDFASP VAGLGSKMGM DATNKWEGET DREWGTPIVM DEAVKQRIDA
IWDDLGIDDA PTL
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