| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0336 |
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| Symbol | |
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| ID | 4920846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 381590 |
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| End bp | 382513 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640161864 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001092467 |
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| Protein GI | 127511270 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTCA ATGATCTATT GTTATTTGTA AGGGTCGCCG ACTGCGGCAG CCTGAGCGGC
GCGGCGGTGG AGTTGGAGAT CTCCGCGGCG GTGGCCAGCG CCAGCCTGAA GCGGCTGGAG
AAGGAGCTAG ATACCGTGCT CTTCATCCGC AGCACCCGCA GCCTGAGGCT GACCGACGCC
GGTGAGCGTT ACCTCAGCTA TTGTCGTCGG GCGCTGGAGG ACCTGCGTCT CGGTGAGCAG
GCGCTGGCCT GCGCCAAGTC GCAGATTGCC GGCAAGTTGA GTGTAGCCCT GCCGTCCGAT
GCCGGGCGTA ACTATATTCT GCCCTGGCTG GATCATCTGA TGGACGAATA TCCCAGGTTA
CAGCTGAGGC TGCATCTCGC CGACAGCCTG ACCAACTTCT ATCACGACAA GATAGATGTT
GCCCTGCGAA GCGGCACCCC AAAGGATTCT AGCCTGGTGG CCTTTAAGAT CTGCTCGGCC
CAGCGCATCC TGTGTGCCTC GCCCGAGTAT ATTGCTGTCC ATGGTCGCCC CGAAACCCTA
AGCGATCTAG AGAAGCATAA CTGCTTGTTT TTCATGTTAG ATGAGAAGAC CCACGACCAA
TGGTGTTTCT ATCGCGACGG TCAGAGTCAC AGGGTGAGGG TGTCGGGCAA TCGCACCTGT
AACGACGCCG AAGTCGCCCG CAAGTGGGCG TTGGCGGGCA AGGGGATCGT CTACAAGTCA
TCCCTAGATC TGGCGGATGA CCTGGCCAGC GGCGCCCTGG TGCCGCTACT GACCCAGTAC
AGCGGCGAGA GCGCCGATCT CTATCTTGTG TGCCCCGGGC GCCAACATGT GACGCCTCTG
GTGCTGACCC TGAGGGAGCA TCTGCGCCAG CGCTGCCAGC AGCGCGCCAA GCGCCTCGCC
GCGGCTTTTA CTCAGCAGGC ATAA
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| Protein sequence | MQVNDLLLFV RVADCGSLSG AAVELEISAA VASASLKRLE KELDTVLFIR STRSLRLTDA
GERYLSYCRR ALEDLRLGEQ ALACAKSQIA GKLSVALPSD AGRNYILPWL DHLMDEYPRL
QLRLHLADSL TNFYHDKIDV ALRSGTPKDS SLVAFKICSA QRILCASPEY IAVHGRPETL
SDLEKHNCLF FMLDEKTHDQ WCFYRDGQSH RVRVSGNRTC NDAEVARKWA LAGKGIVYKS
SLDLADDLAS GALVPLLTQY SGESADLYLV CPGRQHVTPL VLTLREHLRQ RCQQRAKRLA
AAFTQQA
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