| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0329 |
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| Symbol | fis |
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| ID | 4922462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 374408 |
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| End bp | 374713 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640161857 |
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| Product | DNA-binding protein Fis |
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| Protein accession | YP_001092460 |
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| Protein GI | 127511263 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2901] Factor for inversion stimulation Fis, transcriptional activator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000805159 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGATC AGACAACTCA ACCAGAAGCT CATCAGCTTA CCGTAGGCAA AATCGAAACC
GCTAACGGCA CTATCAAGCC TCAGTTACTT CGTGACGCAG TGAAGCGCGC AGTAACTAAC
TTTTTCGCTC AAATGGACGG CCAGGAAGCC GAAGAAGTTT ATGAAATGGT GTTATGTGAA
GTTGAAGCAC CTCTACTAGA TATCATCATG CAACACACTC GTGGTAACCA GACTCGCGCG
GCCAACATGC TAGGCATCAA CCGTGGTACT CTGCGTAAGA AATTAAAGAA GTATGGCATG
AACTAA
|
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| Protein sequence | MFDQTTQPEA HQLTVGKIET ANGTIKPQLL RDAVKRAVTN FFAQMDGQEA EEVYEMVLCE
VEAPLLDIIM QHTRGNQTRA ANMLGINRGT LRKKLKKYGM N
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