| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0317 |
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| Symbol | |
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| ID | 4924048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 362929 |
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| End bp | 363660 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640161845 |
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| Product | uroporphyrinogen III synthase HEM4 |
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| Protein accession | YP_001092448 |
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| Protein GI | 127511251 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTAC TCCTGACGCG CCCCGAAGGG CGCAATCAGT CTATGGCCGA GGCACTGTCA
CAACGTGACG TGCCATTCAC CATAGCGCCG CTGCTAGCGG TCGTCGCAAA TAACGAAGCC
GACCATGAGC ACAAGAAAAA GCTTTTCTAT CAGTCTGATA TCATCATCTT TATCAGCACC
AATGCGGTAG AGTATGCCGA TATTGCCCTG TCGTCAGCTT GGCCTAAGGA TAAGCAATAT
TTTGCGGTCG GTCAGGCAAC CTATTGCGCC CTTAAGGACA AAGGCATTGT GGCCTTTGAG
GCCCCCGAGT CTTGCCAGCA AACCGAAGGC CTGCTTACCT TAGCTCAGCT GCAAGCCATT
ACTGGACAAC AGATCACCAT AGTCAGGGGA GTCGGCGGCC GGGAAACTCT GGCCAGCGAA
CTGGCAGATA GAGGCGCCAA GGTCGACTAC TGGGAGGTCT ATCGCCGCGC CTGCCCACAG
CTCGATCCCC ACACTCCCTA TGAATGGCGA GAGCAAGCAA TTGACACCAT AGTGATTACC
AGTGGTGAAA TTCTGGCCAA CCTAATTACA CTTGTACCTA AAGAATTATT TGCTTGGCTG
CACGCATGTC ATATTATAGT GCCCAGCGCA CGTGTCTATG ACCAAGCCAT TGCGGCAGGT
TTTACACGGG TCACCAATGC AAAAGCAGCA AACCGCGACG CAGTACTCAC AGCCTTAGGT
TTACAGGATT AA
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| Protein sequence | MKLLLTRPEG RNQSMAEALS QRDVPFTIAP LLAVVANNEA DHEHKKKLFY QSDIIIFIST
NAVEYADIAL SSAWPKDKQY FAVGQATYCA LKDKGIVAFE APESCQQTEG LLTLAQLQAI
TGQQITIVRG VGGRETLASE LADRGAKVDY WEVYRRACPQ LDPHTPYEWR EQAIDTIVIT
SGEILANLIT LVPKELFAWL HACHIIVPSA RVYDQAIAAG FTRVTNAKAA NRDAVLTALG
LQD
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