| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0291 |
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| Symbol | |
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| ID | 4920579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 310509 |
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| End bp | 311432 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161815 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001092422 |
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| Protein GI | 127511225 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAA AAACAGCAGA GTTGATTTGG TTTAATGGAG AGATCATGCC TTGGGGGGAT
GCCAAGGTAC ACGTGATGTC GCACGCCTTG CATTACGGCA CCTCGGTGTT CGAGGGGATC
CGCGTCTACG ACACGCCACA GGGACCGGCG GGATTTCGCC TAACCGACCA TGTGCAGCGC
CTGTATGACT CGGCCAAGAT CTATCGCATG CCAGTGCCCT ATAGTTTCGA TGAGACCATG
CAGGCCTGCC GCGACATAGT AAAGAGTAAT AAACTCGACG CCGCCTACAT TCGTCCCCTG
GTGTTTTTCG GCGACGTAGG CATGGGGATC ACCCCACCTA AGGATGCGAA GTGCGATCTC
ATGGTGGCCG CCTTCCCTTG GGGGGCTTAC CTGGGTGAGG GCAGCATGGA GCGCGGCGTC
GATGTGGCCG TGACCTCCTG GAACCGTCTG GCACCGAATA CCATACCTAC CGGCGCCAAG
GCGGGCGGTA ACTATCTCTC CTCGCTGCAG ATCTCTACCG AGGCCAAGCG TAACGGCTTC
GATGAGGGGA TCGCGCTGGA TGTCAACGGC CTGGTAAGCG AAGGTGCCGG TGCCAACCTG
TTTGTGGTCA AAAAGAACAA GCTCTATACC CCGCCAGCTA CGGCCGCCAT CCTGCTGGGG
ATCACCCGAG ATACCATCAT TACCCTGGCG AGAGACCTGG GGTATGAGGT GGTCGAAGAG
CCTATGTCGC GCGAGTTTCT CTATTTGGCA GACGAGATCT TTATGACAGG AACCGCCGCC
GAGATAGTGC CGGTGCGCAG CGTCGATCGT ATCGAGGTGG GCGCCGGTGG CCGCGGCCCA
GTAACCCAGG CCTTGCAGGC AAGCTTCTTT GGCCTGTTTA ATGGTGAGAC CCAGGATAAG
TGGGGTTGGT TAGAGCTGCT TTAA
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| Protein sequence | MAAKTAELIW FNGEIMPWGD AKVHVMSHAL HYGTSVFEGI RVYDTPQGPA GFRLTDHVQR
LYDSAKIYRM PVPYSFDETM QACRDIVKSN KLDAAYIRPL VFFGDVGMGI TPPKDAKCDL
MVAAFPWGAY LGEGSMERGV DVAVTSWNRL APNTIPTGAK AGGNYLSSLQ ISTEAKRNGF
DEGIALDVNG LVSEGAGANL FVVKKNKLYT PPATAAILLG ITRDTIITLA RDLGYEVVEE
PMSREFLYLA DEIFMTGTAA EIVPVRSVDR IEVGAGGRGP VTQALQASFF GLFNGETQDK
WGWLELL
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