| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0221 |
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| Symbol | |
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| ID | 4923845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 235026 |
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| End bp | 236024 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640161744 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | YP_001092352 |
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| Protein GI | 127511155 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.023184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAC CTATTGTGCT TAGCGGTGCC CAACCGTCAG GTGAATTGAC CATTGGTAAC
TACATGGGTG CACTACGTCA GTGGGTTGCG ATGCAAGATA GTCATGATTG CCTATATTGT
GTGGTCGATC TGCATGCCAT TACCGTACGC CAAGATCCGC AGAAGCTGCG TGATGCCTGC
TTAGATACCC TGGCCCTATA CCTGGCCTGT GGTGTCGATC CTAAGAAGAG TACTGTGTTT
ATCCAGTCGC AGGTACCGCA GCATACTCAG CTGGGTTGGG CGCTGAACTG CTACACCCAG
ATGGGTGAGC TGAGCCGCAT GACTCAGTTT AAGGACAAGT CGCAGAAACA TGCCAACAAC
ATCAACGTCG GCCTGTTCGG CTATCCGGTA TTGATGGCTG CAGATATCCT GCTGTACCAG
GCAAACGAGA TCCCTGTGGG TCAAGATCAG AAGCAACACC TTGAACTGAC TCGTGATATC
GCGACACGTT TCAACAATGC CTATGGCGAG ACCTTCACCA TTCCCGAGCC TTTCATTCCT
GAGCTGGGTG CCAAGGTGAT GTCGCTGCAG GATCCATTGA AGAAGATGTC TAAGTCTGAC
GACAACCGCA ACAATGTGAT CGGCCTGCTG GAAGATCCTA AAGCGGTCAT GAAAAAGCTG
AAGAAGGCGA TGACAGACAG CGACGAGCCG CCGGTAGTGC GTTTCGATGT CGAAAACAAG
CCAGGCGTCT CTAACCTGCT GAGCCTGATG TCAGGCGTGA CAGGTCAGAG CATTGCGAGT
TTGGAAGCTG AGTTCGAAGG TAAGATGTAC GGTCATCTTA AAGTGGCTGC CGGTGAGGCG
GTTGTCGGCA TGCTTGAGCC GCTGCAGGAG CGCTTCAAGG AGTACAGAGC CGATCAGAGC
TTCCTCAATC AGGTGATGCA CGAAGGTGCC GAGAAGGCTC AGGCCCGCGC TGAGGTGACC
CTGAAGAAGG TCTACGAGAA GATAGGCCTA CTGCTCTAA
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| Protein sequence | MTKPIVLSGA QPSGELTIGN YMGALRQWVA MQDSHDCLYC VVDLHAITVR QDPQKLRDAC
LDTLALYLAC GVDPKKSTVF IQSQVPQHTQ LGWALNCYTQ MGELSRMTQF KDKSQKHANN
INVGLFGYPV LMAADILLYQ ANEIPVGQDQ KQHLELTRDI ATRFNNAYGE TFTIPEPFIP
ELGAKVMSLQ DPLKKMSKSD DNRNNVIGLL EDPKAVMKKL KKAMTDSDEP PVVRFDVENK
PGVSNLLSLM SGVTGQSIAS LEAEFEGKMY GHLKVAAGEA VVGMLEPLQE RFKEYRADQS
FLNQVMHEGA EKAQARAEVT LKKVYEKIGL LL
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