| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0214 |
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| Symbol | aroB |
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| ID | 4923755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 229315 |
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| End bp | 230391 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640161737 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001092345 |
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| Protein GI | 127511148 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0019522 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0093174 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACAGA TTCAGGTTGA ACTTGGTGTA CGTAGTTACC CTATCTTTAT TGGCCAGAAT
CTCCTCGAAA ATAGCGATTA CTTTTCAAGC TATCTTCAAG GCAAAAAAAT TCTAATCGTA
ACTAATGACA CAATAGCGCC TCTGTATCTG GCTAAGGTAC AGGCGCTATT GGCTTCCTAC
CAATGTGCCG ATCCTGTCAT CTTACCCGAT GGCGAGCAAT ACAAGACACT GTCGCAGATG
GATGCGATTT TTACCTCGCT GCTCGCGCAG AATATGGGGC GTGATTCCGT ATTAATTGCC
TTGGGTGGTG GTGTCATAGG CGACATGACG GGCTTTGCCG CCGCTTGTTA TCAACGCGGT
GTCGATTTTA TTCAGATCCC AACGACCCTG TTGTCACAGG TCGATTCTTC CGTGGGGGGC
AAGACGGCCG TCAACCATCC CATGGGCAAG AACATGATAG GTGCCTTCTA TCAACCTAAG
ATGGTTGCCA TAGATACTGC GTGTCTGCAT ACCTTACCGG CCCGTGAATT TGCCGCCGGC
ATGGCCGAGG TCATCAAGTA TGGCATTATC TGGGATGGCT CATTTTTCAG TTGGTTAGAG
CAGAATGTTG CGGCGCTCAA ATCGTTGGAT GAGGCGGCGC TCACCTATGC TATCGCCAAA
TGTTGCCAGA TTAAGGCCGA CGTAGTGGCG CAAGATGAGA CCGAACAAGG GGTGCGTGCC
CTGTTGAACC TGGGGCACAC CTTTGGTCAT GCCATCGAGG CGGAGATGGG TTATGGCGTA
TGGCTCCACG GTGAAGCCGT GGCGGCTGGC ACAGTACTTG CTGCGCAAAC TGCATCTAAG
ATGGGGCTGG TGGATCAGTC AATTGTTTGT CGAATCGAAG CGATATTCGA GGCATTTGAC
CTACCAACAG AGGCCCCAGA GGCGATGGAC TTCGAACAGT TCATCAAGCA TATGCGGCGT
GACAAGAAAG TGCTGAACGG AAAACTCAGA CTCGTGCTGC CAAAGGCCAT TGGCCAGGCA
GAGGTGTATG GCGAGGTTTC CGAGTCCCTT CTACAAGAGG TCATTAGCCG CGCCTAG
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| Protein sequence | MEQIQVELGV RSYPIFIGQN LLENSDYFSS YLQGKKILIV TNDTIAPLYL AKVQALLASY
QCADPVILPD GEQYKTLSQM DAIFTSLLAQ NMGRDSVLIA LGGGVIGDMT GFAAACYQRG
VDFIQIPTTL LSQVDSSVGG KTAVNHPMGK NMIGAFYQPK MVAIDTACLH TLPAREFAAG
MAEVIKYGII WDGSFFSWLE QNVAALKSLD EAALTYAIAK CCQIKADVVA QDETEQGVRA
LLNLGHTFGH AIEAEMGYGV WLHGEAVAAG TVLAAQTASK MGLVDQSIVC RIEAIFEAFD
LPTEAPEAMD FEQFIKHMRR DKKVLNGKLR LVLPKAIGQA EVYGEVSESL LQEVISRA
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