| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0180 |
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| Symbol | rpsM |
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| ID | 4921086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 189967 |
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| End bp | 190323 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640161699 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001092311 |
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| Protein GI | 127511114 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000423158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00154728 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCCCGTA TCGCTGGCAT TAACATTCCT GATCAGAAGC ACACAGTCAT TGCATTGACT
GCTATCTACG GTATTGGACT AACTCGCGCA CAACAAATCT GCGCGGCTAC TTCAATTGCT
GAAGATGCTA AGATCAAGGA ATTGAGCGAA GCTCAAATAG ACACACTACG CGAAGAAGTT
GCTAAATACA TTGTAGAAGG TGACTTGCGT CGTGAGATCT CTATGAACAT CAAGCGTCTG
ATGGACCTTG GTTGTTATCG TGGTCTCCGC CACCGTCGTA GCCTGCCCCT TCGTGGGCAA
CGTACCAAGA CCAATGCGCG TACTCGCAAA GGTCCACGTA AGCCAATTAG AAAGTAA
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| Protein sequence | MARIAGINIP DQKHTVIALT AIYGIGLTRA QQICAATSIA EDAKIKELSE AQIDTLREEV
AKYIVEGDLR REISMNIKRL MDLGCYRGLR HRRSLPLRGQ RTKTNARTRK GPRKPIRK
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