| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0166 |
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| Symbol | |
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| ID | 4920841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 183724 |
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| End bp | 183915 |
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| Gene Length | 192 bp |
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| Protein Length | 63 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640161685 |
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| Product | 50S ribosomal protein L29 |
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| Protein accession | YP_001092297 |
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| Protein GI | 127511100 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0255] Ribosomal protein L29 |
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| TIGRFAM ID | [TIGR00012] ribosomal protein L29 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000300233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000293635 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAGCGA GCGAACTAAC TCAGAAGAGC GTTGAAGAAC TGAACGCTGA ACTGCTTGGT
CTGCTGCGTG AGCAGTTTAA TCTGCGTATG CAACACGCCA CTGGTCAGTT GACTCAGACT
CACCAGCTCA AAATCGTGCG TCGTAACATT GCGCGCGTTA AGACCATTAT TACTTCTAAG
GCGGGTGCAT AA
|
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| Protein sequence | MKASELTQKS VEELNAELLG LLREQFNLRM QHATGQLTQT HQLKIVRRNI ARVKTIITSK
AGA
|
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| |