| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0155 |
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| Symbol | |
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| ID | 4924225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 175504 |
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| End bp | 177600 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640161674 |
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| Product | elongation factor G |
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| Protein accession | YP_001092286 |
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| Protein GI | 127511089 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0129651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000592155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGCTCGTA CAACTCCAAT TGAGCGCTAC CGTAATATCG GTATCTGTGC TCACGTTGAC
GCAGGAAAAA CCACAACTAC AGAACGTGTT CTCTTCTATA CCGGTATGTC TCACAAGATC
GGTGAGGTGC ATGATGGCGC AGCCACCATG GACTGGATGG AACAGGAGCA GGAGCGTGGT
ATTACTATCA CCTCGGCGGC AACGACCACG TTCTGGCGCG GTATGGATGC TCAATTTACC
GAGCATCGTA TCAACATCAT CGACACCCCT GGCCACGTTG ACTTCACTAT TGAAGTTGAG
CGTTCGCTAC GTGTACTCGA TGGCGCAGTA GTTGTGTTCT GTGGTTCATC TGGTGTTGAA
CCTCAGTCCG AAACTGTATG GCGACAAGCG GACAAGTACC ACGTCCCGCG CTTAGTGTTT
GTCAATAAGA TGGACCGCGC TGGTGCTGAC TTTGAACGCG TCGTTGGACA GATACGTAAC
CGTCTGGGAG CGACTTGTGT ACCTATTCAA TTGAACATAG GTGCAGAAGA AGAGTTTAAG
GGTGTCATTG ACCTGATCAA GATGAAGGCC ATTAACTGGA ACGAATCAGA TCAAGGTATG
ACCTTCAATT ATGAAGAAAT TCCCGCAGAG TTGGCCGACA AGGCCGCTGA GATGCGTGAA
TACCTAGTTG AGAGTGCGGC CGAAGCCTCT GAAGAGCTGA TGGACAAGTA CCTTGAAGAA
GGTGAGCTAT CGGAAGAAGA GATCAAGGCT GCATTACGTC AGCGAACTCT GGCTAACGAG
ATCGTGCTGG CTACCTGTGG TTCTGCATTT AAGAACAAGG GTGTGCAGGC GGTACTCGAT
GCAGTTATCG ATTATCTGCC ATCGCCAGTC GAAGTACCCG CCATTAAGGG TATTGACGAC
AATGAGAATG AAGTCGAACG TCCGGCGGAC GACAACGCGC CATTCTCTGC GTTAGCATTT
AAGATCGCGA CAGACCCATT CGTAGGAACA CTGACCTTTG TGCGTGTTTA TTCAGGCGTA
TTGGAAGCAG GTTCTGGCGT ATATAACTCG GTCAAACAAA AGCGTGAGCG TATTGGTCGT
ATGGTGCAGA TGCATGCAAA CGACCGTAAA GAGATCAAAG AAGTCCGTGC TGGCGACATC
GCGGCGGCTA TTGGTCTGAA GGATGTTACC ACTGGTGACA CCCTATGCGA TGCTGACCAT
AAAGTTATTC TCGAACGTAT GGAGTTCCCT GAGCCCGTAA TCACGATTGC CGTGGAGCCT
AGATCTCAAG CCGACCAAGA TAAGATGGGC ATTGCGCTGC AGAAACTTGC TGCAGAAGAT
CCCTCTTTCC GCGTTGAGAC CAACGAAGAA TCGGGGCAAA CCCTGATCTC TGGTATGGGC
GAGTTGCACT TAGACATCAT CGTAGACCGT ATGCGTCGCG AATTCAGTGT CGAATGTAAC
GTAGGTAAGC CACAAGTAGC GTATCGTGAG ACTATTCGCT CGAGTGTAGA AGTCGAAGGC
AAGTTCGTTC GTCAATCTGG TGGCCGAGGT CAATTTGGTC ACGTTTGGTT GAAGCTTGAA
CCTCAAGAAG AAGGTTTCGG CTATGAATTT GTCAACGAGA TTGTTGGTGG TGTTGTTCCA
AGAGAATACA TCCCTGCAGT AGATAAAGGT ATCCAGGAAC AGATGAAGAA TGGCGTACTC
GCCGGTTTCC CTGTTCTGGA CGTCAAAGTA ACGCTGTTCG ACGGCTCATA CCATGATGTC
GACTCGAACG AGATGGCGTT TAAAGTGGCC GCCTCCATGG GCTTCAAGAA GGGTGCTCTC
GAAGCAGACC CTGTGTTACT CGAACCTTGT ATGAAGGTTG AAGTAACCAC TCCTGAAGAT
TACATGGGGG ATGTAGTAGG CGACTTAAAC CGACGTCGCG GCATGATCGA AGGTATGGAC
GACGGCATTG GCGGCGTCAA AATCGTTCGA GCTGTAGTAC CTCTATCTGA AATGTTTGGT
TACGCGACAG ACTTGCGTAG CGCTACCCAA GGACGTGCCT CATACTCTAT GGAGTTCCTG
AAGTACTCGG ATGCGCCGCA GAATGTTGCA AAATCAGTTA TAGAAGCGCG CGGATAA
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| Protein sequence | MARTTPIERY RNIGICAHVD AGKTTTTERV LFYTGMSHKI GEVHDGAATM DWMEQEQERG
ITITSAATTT FWRGMDAQFT EHRINIIDTP GHVDFTIEVE RSLRVLDGAV VVFCGSSGVE
PQSETVWRQA DKYHVPRLVF VNKMDRAGAD FERVVGQIRN RLGATCVPIQ LNIGAEEEFK
GVIDLIKMKA INWNESDQGM TFNYEEIPAE LADKAAEMRE YLVESAAEAS EELMDKYLEE
GELSEEEIKA ALRQRTLANE IVLATCGSAF KNKGVQAVLD AVIDYLPSPV EVPAIKGIDD
NENEVERPAD DNAPFSALAF KIATDPFVGT LTFVRVYSGV LEAGSGVYNS VKQKRERIGR
MVQMHANDRK EIKEVRAGDI AAAIGLKDVT TGDTLCDADH KVILERMEFP EPVITIAVEP
RSQADQDKMG IALQKLAAED PSFRVETNEE SGQTLISGMG ELHLDIIVDR MRREFSVECN
VGKPQVAYRE TIRSSVEVEG KFVRQSGGRG QFGHVWLKLE PQEEGFGYEF VNEIVGGVVP
REYIPAVDKG IQEQMKNGVL AGFPVLDVKV TLFDGSYHDV DSNEMAFKVA ASMGFKKGAL
EADPVLLEPC MKVEVTTPED YMGDVVGDLN RRRGMIEGMD DGIGGVKIVR AVVPLSEMFG
YATDLRSATQ GRASYSMEFL KYSDAPQNVA KSVIEARG
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