| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0098 |
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| Symbol | |
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| ID | 4923470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 108959 |
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| End bp | 110218 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161609 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001092229 |
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| Protein GI | 127511032 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00301262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTGA TTATCGGCAC CCTGTTGTTT GGCATGTATC GTCAATTGAT CAACGAGCAG
GAGCTGCAGA CTAATCAGCA CCTGGCGGCA GAAAAACTGC GTTATCAGCA GATGGCGCTC
ACCCTGGACA GACGCAGCTT TGCCACCCAG ATCCGCACTG CCGATCCCAA GACGGCCCTG
GTGGTGTGGC GCAGCTCGCT GGATCTGGTG GGGGCCCTGA GCCTGATGCC CGATGACATG
CCGCTGCTGC CGGAGACGCG TGACTTTCCC ATTCTTACCA GCGGGCCGGA CAAGCTGCAT
ATCTTAACCG GTGGCCTGGT GATCACCCGT TATGGTCCCG TACTGATCGC AACCCGTACC
GATCAGCTGG CCACCCTGAT TGAGCGCTTC GTCAACGCGG CCATCACGGC GCTGATGTTG
ACTATCGTGT TGACCCTGGC CCTAGGCTAC CTGTTTTCCA AGGCGATTCT GCGCCGCCTG
GTGCAGTACA ACCGCCTGAG TCGCCGCATC GAGCGGGGCG AGTATTCCAC CCGTCTGCCG
GTGAGCTGGC GCCAGGATGA GTTTGACATG CTGGCGGGCA ACTTCAACCA GGTGTTGGAT
ACCCTGGAGG CTAACCTGCA CGCGGTGCGC GGCGCCACTG ACAATATCGC CCACGATCTC
AGAACTCCGC TGTCTCATCT GAGGATAGGC CTGGAGCAGT TACCGCAGAG GCCCGCCGAG
GAGCTGGACG AGGCCAGCGC GATTCTGATC GAGGAGCTGG ATCACTGCCT GGCGACCTTC
GATGCCATGT TATCTCTCAC TCGCATCGAG GAGGGGCAGC AGGATCTCGA GCTACAACCC
TTGAGCCTTA ACGACTTGTG TCAGGACTTG TTTGAGATGG CCGAGGCGAT GGCCGAGTCC
AATGGCCAGA CCCTAAGCCT GTCACTGGAC CAAGACTATA GCGTGATGGG GGATAAATAC
CTGCTGTTCC AGGCGCTGTT TAACCTGGTG GACAACGCCA TCAAGTATTC CGGCGAGGGC
GCCAAGATAG AGATAATCCA GCAAGGCAAT GAAATACTGA TCCGCGATAA CGGGCCGGGG
ATCCCGGATG ATGCCACCGA GAAGGTGTTC GATCGTCTGG TGCGTTTGGA CCCGAGCCGT
CACAACAAGG GCACGGGATT GGGGCTTTCG CTGGTCAAGG CTATCCTGCA ACGTCATAAT
GCCCGCATCG AGCTCTCCGA CAACCAGCCT GGGCTGCAGG TGAGCATACG TTTTTCATAG
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| Protein sequence | MTLIIGTLLF GMYRQLINEQ ELQTNQHLAA EKLRYQQMAL TLDRRSFATQ IRTADPKTAL
VVWRSSLDLV GALSLMPDDM PLLPETRDFP ILTSGPDKLH ILTGGLVITR YGPVLIATRT
DQLATLIERF VNAAITALML TIVLTLALGY LFSKAILRRL VQYNRLSRRI ERGEYSTRLP
VSWRQDEFDM LAGNFNQVLD TLEANLHAVR GATDNIAHDL RTPLSHLRIG LEQLPQRPAE
ELDEASAILI EELDHCLATF DAMLSLTRIE EGQQDLELQP LSLNDLCQDL FEMAEAMAES
NGQTLSLSLD QDYSVMGDKY LLFQALFNLV DNAIKYSGEG AKIEIIQQGN EILIRDNGPG
IPDDATEKVF DRLVRLDPSR HNKGTGLGLS LVKAILQRHN ARIELSDNQP GLQVSIRFS
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