| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0095 |
|---|
| Symbol | |
|---|
| ID | 4921132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 107182 |
|---|
| End bp | 107541 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640161606 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001092226 |
|---|
| Protein GI | 127511029 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3111] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00156] conserved hypothetical protein TIGR00156 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00107366 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGA AGAAACTCAC CGGCACCCTA ATCCTTTCTT GCGTACTCAC CCTACCTGCC
TTCGCCGCCT ATAACGGCCC CAAGGCGGGC GGGGTGATCC AGCAAGCTAG CGACGCCCAC
ACGGCCAAAG ATGACACACC AGTGGAGCTG ACAGGCAAGC TGATCAAGAG CCTGGGCGAT
GAGAAATACC TGTTTCGCGA CAGCAGCGGC GAAGTCGAGG TGGAGATAGA CAACGCCCTG
TGGCGCGACA TAGAGGTCTC CAGTGACACA ACTGTCACCC TGAGGGGCGA GGTGGACGAC
GAATGGCGCG GTATCGAGAT AGAGATCGAC AGCATAGAGT TGGTGGATCA GGCGCATTAG
|
|---|
| Protein sequence | MMQKKLTGTL ILSCVLTLPA FAAYNGPKAG GVIQQASDAH TAKDDTPVEL TGKLIKSLGD
EKYLFRDSSG EVEVEIDNAL WRDIEVSSDT TVTLRGEVDD EWRGIEIEID SIELVDQAH
|
|---|
| |