| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0093 |
|---|
| Symbol | |
|---|
| ID | 4922613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 105308 |
|---|
| End bp | 105988 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640161604 |
|---|
| Product | molybdate ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001092224 |
|---|
| Protein GI | 127511027 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4149] ABC-type molybdate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR02141] molybdate ABC transporter, permease protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.30684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGC AGGCGCTGCT GCTTTCAATC AAGTTAAGCT GTGTCACTGT GCTGGTGTTG
ATCCCCTTTG CCATCTGGGC CGGTCGCTTC CTGGCGTACC GTCAGTTTAG AGGCAAGTCC
TGGCTGGAGG CGCTGATTAT GGTGCCTCTG GTGTTGCCGC CGACGGTGAT CGGCTACTAC
CTGCTGGTGG GGCTGGGCAG CCAATCCTGG CTGGGTCAGA CGTTAGAAGC CCTGCTGGGG
CAGCAGCTGG TGTTCCATTT CTCTGGCCTG GTGGTGGCCT CAGTGCTGGT CAATATTCCC
TTTGCCATAC AGCCGATTCA GCGCGCCTTC GAGTCTGTGC CCGAAGAGGT ACGCGACGCC
GGTGCCTGCT GCGGCATGAG CCCGGCCAAG GTGTTGTTTA AGATAGAGCT GCCCCTGGTG
TGGCCCGGTG TGCTAACCGC GCTGGTGCTC TGTTTCTCCC ATGTACTGGG CGAGTTTGGT
GTGGTGTTGA TGATGGGCGG TAATATCGCC GGCGAGACCA AGACGATCGC CATCTCCATC
TATGACAGCG TGCAGGCGTT CGATTTCGCC GCAGCTGGGC AGATGTCACT GTTGCTCCTG
CTGTTTGCCA TTACCGCGTT GGCGCTCACC ACGAGCCTAT CCCGTCGATT AGGAGGCGTG
AGTGTCTCAA GACGTCGCTG A
|
|---|
| Protein sequence | MDWQALLLSI KLSCVTVLVL IPFAIWAGRF LAYRQFRGKS WLEALIMVPL VLPPTVIGYY
LLVGLGSQSW LGQTLEALLG QQLVFHFSGL VVASVLVNIP FAIQPIQRAF ESVPEEVRDA
GACCGMSPAK VLFKIELPLV WPGVLTALVL CFSHVLGEFG VVLMMGGNIA GETKTIAISI
YDSVQAFDFA AAGQMSLLLL LFAITALALT TSLSRRLGGV SVSRRR
|
|---|
| |