Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0092 |
Symbol | |
ID | 4923009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 104484 |
End bp | 105308 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640161603 |
Product | molybdenum ABC transporter, periplasmic molybdate-binding protein |
Protein accession | YP_001092223 |
Protein GI | 127511026 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0725] ABC-type molybdate transport system, periplasmic component |
TIGRFAM ID | [TIGR01256] molybdenum ABC transporter, periplasmic molybdate-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.380842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTAC TCAGAGGTTT TGTCTTAGGC TGCCTGCTGC TGTTGGGAGT TACCCCAAGC TGGGCGGCCG AGGTGCCGGC CATCGCCGCC GCCTCCAACA TCAAGTTTGC CTTGGATAAG ATCGCCGCCG ACTTTACCCA GGATACGGGC AAGCGGGTGC GCATCTCCTA TGGCTCCTCA GGCAACTTCG TGGCGCAGCT GCGTCATGGC GCGCCGTTCG AACTTTTTCT GTCGGCAGAC GACAAATATA TCTATCAATT ACATAAGCTT GGTGTAACTC AGAGCGACGG TGAGATCTAC GCCATTGGGC GTCTGGCGCT GGCGGCGCCT AAGCGTTCGC CTTTGAGCCT AGATACCGAG CTTGTCGGCG TGAAACGCTT GCTTGAGCAG GGTGAATTGA AGCGTTTTGC CATCGCCAAC CCAGATCACG CTCCCTATGG CGAGCGTGCC CGGGAGGCGC TGCAACATCT GGGACTCTGG CAACCTCTGC AGCCCTATCT CATCTACGGC GAGAACGTGT CTCAGGCGGC GCAGTTTGCC CTGAGCGGTT CCACCGACGG CGGCATAGTA GCCCTGTCGC TGGCGATGGC GCCTCAGTTT CGCGCCGCCA GCCACTATGT GGCCCTGCCG AGCGAGTGGC ATTCGCCCAT GAATCAGCGC ATGGTGCTCA CGCCTAAGGC GGGGGAGACC GCCAAAGCCT TCTATGCCTA CCTGTCGCAG GCAAAGGCGA GGGCGGTATT CCTTGAGTTT GGCTTCGGCC TGCCCGCTGA CAGCCAGGGT GATGAAGTCG TTGATGCTGC TAACCAGCCG GCCGGAGACC ACTGA
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Protein sequence | MDLLRGFVLG CLLLLGVTPS WAAEVPAIAA ASNIKFALDK IAADFTQDTG KRVRISYGSS GNFVAQLRHG APFELFLSAD DKYIYQLHKL GVTQSDGEIY AIGRLALAAP KRSPLSLDTE LVGVKRLLEQ GELKRFAIAN PDHAPYGERA REALQHLGLW QPLQPYLIYG ENVSQAAQFA LSGSTDGGIV ALSLAMAPQF RAASHYVALP SEWHSPMNQR MVLTPKAGET AKAFYAYLSQ AKARAVFLEF GFGLPADSQG DEVVDAANQP AGDH
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