| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0088 |
|---|
| Symbol | |
|---|
| ID | 4923538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 102681 |
|---|
| End bp | 103211 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640161599 |
|---|
| Product | molybdenum cofactor biosynthesis protein B |
|---|
| Protein accession | YP_001092219 |
|---|
| Protein GI | 127511022 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0521] Molybdopterin biosynthesis enzymes |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR02667] molybdenum cofactor biosynthesis protein B, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.151206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCATT GCACGAGAAC TCAATTTGAA CCGCTCAATA TCGCGGTATT AACCCTGTCC
GACTCCCGGG AGCTGAGCCA GGACACCTCG GGACAATTTT TACAAGACGC CTTGTTAGAG
GCCGGGCACA AGCTGGCGGA GCGCCGCCTG ATTAAAGATG ACAAGTATCA GATACGTTCG
GTATTGTCTC AGTGGATCGC ATCGAATGAT GTGCAGGTGA TTATCACCAC AGGCGGCACA
GGCTTTACCG AGCGCGACAA TACGCCTCAG GCGGTCAGAC CGCTATTTGA TCGTGAGATT
GAAGGCTTTG GTGAGCTGTT CCGTCATATC ACCTATACAG AGCTGGGCAC CTCGACGGTG
CAGTCCCGCG CCCTGGGTGG CTTCGCCAAC AAGACCGCCA TCTTCTGTCT GCCGGGCTCA
ACCGGTGCCT GCAAGACGGG CTGGAACAAG ATTTTAAGAG AACAACTGGA TGCCACTCAC
AGACCCTGTA ACTTTGTGAT GCACGTGAAG AAGGTAGCAA TTGATGAGTA G
|
|---|
| Protein sequence | MGHCTRTQFE PLNIAVLTLS DSRELSQDTS GQFLQDALLE AGHKLAERRL IKDDKYQIRS
VLSQWIASND VQVIITTGGT GFTERDNTPQ AVRPLFDREI EGFGELFRHI TYTELGTSTV
QSRALGGFAN KTAIFCLPGS TGACKTGWNK ILREQLDATH RPCNFVMHVK KVAIDE
|
|---|
| |