| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0086 |
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| Symbol | |
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| ID | 4920526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 99591 |
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| End bp | 101240 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161597 |
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| Product | electron-transferring-flavoprotein dehydrogenase |
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| Protein accession | YP_001092217 |
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| Protein GI | 127511020 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0288135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGCG AATCGATGGA GTTCGACGTC GTTATCGTTG GCGCAGGCCC AGCTGGCCTG
GCTACCGCAT GTCGACTAAT GCAAATCTCA CAAGACGCCG GCCAGGAGCT GACAGTCTGT
GTGGTCGAGA AAGGCTCGGA AGTGGGCGCG CACATTCTCT CGGGTGCCGT GTTCGAACCT
AAGGTGCTCG AAGAGCTATT TGGTGACTGG AAAGAGCAAG GTGCACCGCT GCACACGGCG
GTGACCCATG ACGAGCTGTT TATGCTTAGC TCAGACTCGG CCTCACGCGC CATGCCCAAT
GCCTTTATCC CTAAGACGAT GCACAACGAT GGCAACTATA TCATCAGCGT CGGCAACCTG
GCCCGTTGGT TGGCCGAGCG TGCCGAGGCC TTGGGCGTCG AGATCTTCCC TGGCTTCCCC
GCCAGCGAGC TGCTGTTTAA CGAGGATGGC AGCGTCAAGG GGATCATCAT AGGCGATATG
GGCGTCGGCG CCGATGGTGA GCCCAAAGAC AGCTATGAAC CGGGCATGGA ACTGCACGCC
AAGTACACTG TATTTAGCGA AGGCTGCCGT GGCCACCTGG GCAAGCAGCT GATCGAGAAG
TTCCACCTGG ACAACGGCAA GACGCCGCAA CACTACGGCC TGGGCTTCAA GGAGATCTGG
AAGGTCCCCG CCGAGCAACA CCAGCAGGGT AAAGTCGTTC ACACGGGTGG CTGGCCACTG
ACAGACGGCG CCTCAGGTGG CGGCTTCCTC TATCATATGG AAGACAACCA GATCGCCGTG
GGTCTCATCA TAGATCTCAA CTATCAGAAC CCACATCTGA GCCCATTCGA TGAGTTCCAG
CGCTACAAGA CACATCCAGT GATCAGCCAG TACCTACAGG GCGGTGAACG CCTCTGCTAT
GGCGCCCGCG CCATCACCAA GGGTGGTCTC AACTCGCTGC CTAAGATGAG CTTCCCTGGC
GGCCTGATCA TAGGTTGTGA CGCAGGTACC CTGAACTTCG CCAAGATCAA GGGCACCCAC
ACGGCGATGA AGAGCGGCAT GATCGCGGCC GAAACCATCT GCCACGCCCT GCATGCCGGC
GTAGAAGGCG GCAAAGATCT CGACTGCTAC CAGGAGAAGT TCGAACAGAG CTGGCTACAG
GATGAACTCT ACTGCTCACG CAACTTCGGC CCGGCGATGC ACAAGTTCGG AGCATACCTG
GGCGGCGCCT TCAACTATAT CGACCAGAAC TGGTTTGGCG GCAAGTTCCC TATCACCCTG
CGGGATGAAA AGGCCGACTA TGCCCAGATG GCCGAGGTCA GTGCCTACAG CAAGATAGAT
TATCCAAAGC CTGACGGTAA GTTAAGCTTC GACAAGCTCT CCTCCGTCTA CCTGTCGAAC
ACCTTCCACG AAGAAGATCA GCTGTGTCAC CTGCGTCTCA AAGACGAGCG TATCCCTATC
GAGGTGAACC TGGTCAAGTT CGACGAACCG GCCCAGCGTT ACTGCCCGGC GGGTGTGTAT
GAGGTGGTGG AAGAAGCCGG CGAGAAGAAA TTTGTCATCA ACGGTCAGAA CTGCATCCAC
TGTAAGACCT GTGACATCAA AGATCCGAGC CAGAACATCA CCTGGGTCAC CCCAGAGGGC
GGCGGCGGAC CTAACTATCC GAACATGTAA
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| Protein sequence | MERESMEFDV VIVGAGPAGL ATACRLMQIS QDAGQELTVC VVEKGSEVGA HILSGAVFEP
KVLEELFGDW KEQGAPLHTA VTHDELFMLS SDSASRAMPN AFIPKTMHND GNYIISVGNL
ARWLAERAEA LGVEIFPGFP ASELLFNEDG SVKGIIIGDM GVGADGEPKD SYEPGMELHA
KYTVFSEGCR GHLGKQLIEK FHLDNGKTPQ HYGLGFKEIW KVPAEQHQQG KVVHTGGWPL
TDGASGGGFL YHMEDNQIAV GLIIDLNYQN PHLSPFDEFQ RYKTHPVISQ YLQGGERLCY
GARAITKGGL NSLPKMSFPG GLIIGCDAGT LNFAKIKGTH TAMKSGMIAA ETICHALHAG
VEGGKDLDCY QEKFEQSWLQ DELYCSRNFG PAMHKFGAYL GGAFNYIDQN WFGGKFPITL
RDEKADYAQM AEVSAYSKID YPKPDGKLSF DKLSSVYLSN TFHEEDQLCH LRLKDERIPI
EVNLVKFDEP AQRYCPAGVY EVVEEAGEKK FVINGQNCIH CKTCDIKDPS QNITWVTPEG
GGGPNYPNM
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