| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0080 |
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| Symbol | |
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| ID | 4920530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 93574 |
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| End bp | 94866 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161591 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001092211 |
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| Protein GI | 127511014 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCGCC TGTTTATTCT CATCTATAGC ACTGCCCTGG CGATCTTCTT TATTGCGGTG
ATCGCCATGG ACCAGTTTGA ACTCTTCTCC ACCGACTCTC TGGACGCCAC CTCGTTGGCC
AACGAGATCA CCGCCACCCG CAACTTGGTA GACAAGATAG GCGAGGCTCA GGGAGCGCAA
GCGGCTGAGC TGGCGCTGCA AGGCTTTGCC AAGGATATCC ACCTGGCGCT GACCCGCTAT
GACATCAAGG ATGACACCCT GAGCGAGGCG ATCAAACAAG GGGTTAAAGA CTACGGCCTC
TACATTGAAG ATGTGGACGA GAATCAGGCC TACTTCAGCC TGAAGAGCAA CCCAGAGGTG
GTCTTTGGCA TCATCAACGA CCCGGACTCC CCCTTTATCA ACACCCTCAA CCGCAAAGAG
TGGTTTGTCT TCGTCGAGTT GTGTGCGGCA CTGGCGCTTA TCAGCATCAT GGTGCTGTTT
GTGATCTCCC GGCGACTGGC GCGACTGGAG AAGACCTGTA TCGCCTTCGC CTACGGCGAT
TTTAGCGCCC GCGCCTCCAC CAGCAGCCTT CACAGCGTGG GACAGCTTAA CCTGTCGTTC
AACATCATGG CCGATCGCAT CTCTCAGCTG ATCCAGAGCC ATAAGAACCT CACCAACGCC
ATCGCTCACG AGTCACGCAC TCCCATCTTT CGCATCCAGT GCAACCTGGA CATGCTGGAC
GACTCGGGCG TACGCCCGGA GCAGATGCAG TATTTGGAGG GAATTCAGGA AGATCTCAAC
GAACTGGGCG GCATGATCGA GGAGCTGTTG CACTTCGCCA AGCTGGAAAG GCCTGATGCC
CAACTCAGCC TGACACCAAC CAGGCTCTAC CCGCTGCTGG CCAGCCAGCT GGAACACCTG
CAGTTCGAGA CGCCCAAACG CCTGCAGCTT AGCGGTGACG ACAGCCTGAT TGCTCCCATC
GCCAACCACC TGCTGCTGCG AGCCACCAGC AACATCATAC GCAACGGCTA CAAGTACGCC
CAAAGTTGCG TCAACGTGAC TCTTAGCAGC GACGAGACGA GCGTGCTGAT CGAGATCGCC
AACGACGGAC CGCCCATTCC CCGGGACTAT TGGCAGTCTA TCTTCGAGCC CTTCGTGCGT
CTGGACAAGG CCAGAGACAG GCAGAGTGGC GGCCACGGCC TTGGACTGGC CATCGCCAAG
CAGATAGTGC GTCAGCATCA GGGCGAGCTG ACCCTGGGCG ACAGCGAGCT GGGCGGCCCC
TGCTTTACCC TGCGCCTGCC CAAGGCAGAA TGA
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| Protein sequence | MTRLFILIYS TALAIFFIAV IAMDQFELFS TDSLDATSLA NEITATRNLV DKIGEAQGAQ
AAELALQGFA KDIHLALTRY DIKDDTLSEA IKQGVKDYGL YIEDVDENQA YFSLKSNPEV
VFGIINDPDS PFINTLNRKE WFVFVELCAA LALISIMVLF VISRRLARLE KTCIAFAYGD
FSARASTSSL HSVGQLNLSF NIMADRISQL IQSHKNLTNA IAHESRTPIF RIQCNLDMLD
DSGVRPEQMQ YLEGIQEDLN ELGGMIEELL HFAKLERPDA QLSLTPTRLY PLLASQLEHL
QFETPKRLQL SGDDSLIAPI ANHLLLRATS NIIRNGYKYA QSCVNVTLSS DETSVLIEIA
NDGPPIPRDY WQSIFEPFVR LDKARDRQSG GHGLGLAIAK QIVRQHQGEL TLGDSELGGP
CFTLRLPKAE
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