| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0073 |
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| Symbol | |
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| ID | 4922099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 86819 |
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| End bp | 88162 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640161585 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001092205 |
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| Protein GI | 127511008 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCGT CTTCTATTAT TCAAACGGCG CCAGGTGCAT TGATTAAGCC GTACCAAGCT
AACATTACCG TCCCTAACTG GATGCTGAGC TCGATGGAAC GAGTGATGCA GTATTATGTC
GACAAGAATC TGCGACTCGA TACCCAGTCC GCCTCCATGA TGCCGGCGCC CGTCGAAGGC
AAGAAGTACA TGCTCTATGC TCATGTGCCT TTCTGCCATA CCCTGTGCTC CTTCTGCACC
TTCCACCGTT TCCTGTTTAA GGAGGAGAAG GCGCGCGCCT ATTTCGTCTC GCTGCGTAAG
GAGATGGAGA TGGTTAAGGC GCTGGGCTAT GACTTCGAGT CCATGTATAT CGGCGGCGGC
ACCACAACCG TATTAGAAGA TGAGCTGGCG CGCACGATTG AATTTGCCAA GAAGCTGTTC
CCAAGCATCA AAGAGGTTTC CTGCGAGTCG GATCCTCAGC ATCTGGACAG CCCAGGCTTT
AAGCAGCTGG AAGGCCTGGT GGATCGCATG TCTATCGGGG TGCAGAGCTT CAACGACGAC
ATCCTGGCGA TGACAGATCG TCTGGAGAAG TTTGGCTCGG GCCAGCAGAC CTTCGATAAG
ATCATGGCGG CCAAGGAGCT GTTTCCTATC ATCAACGTGG ATCTTATCTT CGGCTTCCGT
GGCCAGACAG ATGAGGTGAT TCAGCACGAC CTGGATATGG CCTCACGCCT GGATCCCCGC
CAGATCACCA CCTATCCCTT GATGATCACC CATCAGACCC GAAAGAGCGT CAAGGGCAAG
CTGGCCGCGC CTCAGGGGGA TATGGCGCGT CAATACCGCC AGATCCTCAA CAGCCTGAAT
GGTCAGTACA ACCAGCTGTC GGCCTGGGCA TTTGGCAAGG CCAACAACGA AGGTTTCGAC
GAGTATGTAA TCGACTATGA CGAGTATCTT GGTGTAGGTT CGGGCTCCTT CAGCTTCCTC
AACGACACCC TGTATGTGAA CACCTTCTCC CTGCGTAAGT ATCAGGAGAA TATCGCCTCG
GGTCGCATGG GCGTCGAGCA GCAGAAGAAC TATAGCCAGA AGGATGTGAT GCAGTATCGC
TTCCTGCTGG GGATGTTCTC GGGTCGCCTG TCGCGCAAAT ATTTCCGTGA CACCTTCGGC
GTCAATCTGG ATTGGGCCCT GTTTAAAGAG ATGACCTCGA TGAAGGCGAT CGGCGCCATC
AAGAATGACC CGAACGACCC CGATAATCTC ATCGTCACGG ATAACGGCAA GATGATGGGC
CTCTTGATGA TGAAAGAGTT CTACTCAGGC ATGGACAACG TGCGGGCACA GCTGCGTAAG
CCGCTCAAGC CCTGCGATAT GTAG
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| Protein sequence | MSSSSIIQTA PGALIKPYQA NITVPNWMLS SMERVMQYYV DKNLRLDTQS ASMMPAPVEG
KKYMLYAHVP FCHTLCSFCT FHRFLFKEEK ARAYFVSLRK EMEMVKALGY DFESMYIGGG
TTTVLEDELA RTIEFAKKLF PSIKEVSCES DPQHLDSPGF KQLEGLVDRM SIGVQSFNDD
ILAMTDRLEK FGSGQQTFDK IMAAKELFPI INVDLIFGFR GQTDEVIQHD LDMASRLDPR
QITTYPLMIT HQTRKSVKGK LAAPQGDMAR QYRQILNSLN GQYNQLSAWA FGKANNEGFD
EYVIDYDEYL GVGSGSFSFL NDTLYVNTFS LRKYQENIAS GRMGVEQQKN YSQKDVMQYR
FLLGMFSGRL SRKYFRDTFG VNLDWALFKE MTSMKAIGAI KNDPNDPDNL IVTDNGKMMG
LLMMKEFYSG MDNVRAQLRK PLKPCDM
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