| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0063 |
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| Symbol | |
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| ID | 4921577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 75104 |
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| End bp | 77959 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640161575 |
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| Product | molybdopterin oxidoreductase |
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| Protein accession | YP_001092195 |
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| Protein GI | 127510998 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAA CGCGCAAAAC AAATGAGGCA GTCGCAACGG CTAAGCCAAG CTTAGGCATC
AGCCGTCGTC AATTCATGAA GCATGCGGGT ATCACAACCG GTGGTATTGC TGCAGCCTCT
CTTCTCGGTA CCGGCATGAT GCGCCGCGCC GAAGCGAAAG ATATTCCACA CGATGCCCCA
ATCGAGATCA AGCGCACCGT ATGTAGCGCC TGTGCCGTGG GCTGTGGTCT GTATGCAGAA
GTCCAAAACG GTGTCTGGAC GGGTCAGGAA CCAGCATTCG ATCACCCATT CAATGCCGGT
GGTCACTGTG CCAAAGGTGC TGCGCTGCGT GAACATGGTC ACGGCGAGAA GCGTCTTAAG
TACCCAATGA AGCTGGTCGA CGGTAAGTGG AAGAAGCTCT CTTGGGAGCA GGCCTTCAAC
GAAGTTGGCG ACAAGATGCA GAGCATCCGT CAAGAGTCGG GCCCAGATTC ACTCTACTTC
ATGGGTAGCG CCAAGTTCTC TAACGAAGGC TGCTACATGT ACCGTAAATT TGCGGCCATG
TGGGGTACCA ACAACGTCGA CCACTCGGCA CGTATCTGTC ACTCTACCAC TGTAGCCGGT
GTTGCTAACA CCTGGGGTTA CGGTGCGCAA ACCAACTCTT TCAACGACAT TCAGAATGCG
AACGCGATCT TCTTCATCGG TTCAAACCCT GCCGAGGCAC ACCCTGTTGC CATGCAGCAT
ATTCTGATCG CCAAAGAGAA GAACAACGCC AAGATCATCG TGGTTGACCC ACGTTTCTCT
CGCACCGCGG CTCACTCTGA TCTGCACTGT GCACTGCGTC CAGGTACCGA CATTCCTTTC
ATCTACGGTA TGTTGTGGCA CATCTTCGAA AATGGCTGGG AAGACAAGGC CTTCATCCAG
CAGCGCGTGT TCGAGATGGA CACCATCCGC GAAGAGGTGA AGAAGTTCCC ACCACAAGAA
GTGGCTAACA TCACAGGCGT GAGTGAAGAG CAGGTTTACC AAGCGGCTAA GCTGATGGCG
GAAAACCGTC CTGGTACTGT GGTTTGGTGT ATGGGTGGTA CCCAGCACCA CGTTGGTAAC
GCCAACACCC GTGCCTACTG TATCCTGCAG CTGGCTCTGG GCAACATGGG CGTATCTGGC
GGCGGTACTA ACATCTTCCG TGGTCACGAT AACGTACAGG GCGCAACCGA CCTTGGTCTG
CTGTTTGATA CCCTGCCTGG CTACTATGGC CTCAAGACAG GTTCTTGGAA GCACTGGTCA
CACGTTTGGG ATCTGGATTT CGACTGGGTT AAGGGTCGCT TCGACCAGAA CGAATACCTG
GGTCGCATCC CAATGAACAC TCCTGGTATT CCATGTTCTC GTTGGCACGA CGGCGTATTA
GAAACGCCAG AGAAGCTGGC GCAGAAAGAT CGCGTGCGCA TGGCCTTCTT CTGGGGGCAA
TCTGTTAACA CAGAAACCCG TCAGCGCGAG GTGCGTGACG CCCTAGATAA GATGGACACG
GTTGTTGTTG TGGATCCATT CCCAACTATG GCGGGTGTCA TGCACCGTCG TAAGGATGGT
GTCTACCTAT TACCAGCAGC GACTCAGTTC GAGACCGAAG GTTCAGTGTC TAACTCTGGC
CGTAGCCAGC AGTGGCGTGA GAAGGTGATC GAGCCGTTAT TCGAATCTAA GACAGATATC
GAGATCATGT ATCGCCTATC GCAGAAACTC GGTTTCGACA AGGAATACAC TAAGCGCATC
GCAAAAGATG CCAAAGACAT GCTAGTGATC GAAGACATCA CCCGCGAGAT CAACCGCGGT
ATGTGGACTA TCGGTATGTC TGGCCAAAGC CCTGAGCGTC TGAAGCTGCA CACCCAAAAC
TGGGGCACCT TCAGCAACAA GACGCTTGAA GCAGAAGGCG GCCCAGCCAA GGGCGAAACC
TATGGTCTGC CATGGCCATG TTGGGGCACA CCAGAGCAGA AACACCCTGG TACCCAGATC
CTCTACAACA CAAACAAACA CGTGCTGCAG GGTGGTGGTA ACTTCCGTGC CCGTTATGGC
GTCGAATACC AAGGCAAGAA CCTGCTGGCC GAAGGCAGCT TCTCTAAGGG CAGCGAGATC
CAAGACGGTT ACCCAGAGTT CAGCGACAAG CTGCTCAAGC AACTGGGCTG GTGGGACGAT
CTGACCGCCG AAGAGAAGGC AGAAGCCGAA GGCAAGAACT GGAAGACCGA CCTTTCTGGC
GGTATCCAGC GTGTGGCCAT GAAGCACGGC TGTATTCCAT TTGGTAACGC TAAGGCCCGC
TGTATCGTGT GGACCTTCCC GGATCAAGTG CCTGTGCACC GCGAGCCGCT GTACACACCA
CGTCGCGATC TCGTGTCTAA GTACCCAACC TATGACGACA TGCAGGTACA TCGTCTACCG
ACGCTTTACA AGTCTATCCA AGAGAAAGAC ACGGCAACCA AGTACCCACT GGGTCTGACC
TCTGGTCGTC TGGTTGAGTA CGAGGGTGGT GGTGAAGAGT CTCGCTCTAA CCCATGGCTG
GCCGAGCTAC AACAAGAGAT GTTTGTTGAG ATCCACCCAG GCGATGCCGC CGACCGTGGT
ATCCGCAACG GCGATACCGT ATGGCTGGAA GGCGCCGAAG GCGGCCGCAT CAAGATCAAG
GCCATGGTTA CTCCTCGCGT TAAGCAAGGT GTTACCTGGA TGCCATACCA CTTCGCCGGT
GTGATGCATG GTGAGAGCCT AGAGAATAAC TATCCAGAAG GTACTGTGCC TTATGTGATT
GGTGAGTCTG CGAACACGGC ATTGACCTAT GGTTATGACC CTGTCACGCA GATGCAAGAG
ACCAAAGCGT CGCTTTGTCA GATCACTAAA GCTTAA
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| Protein sequence | MKLTRKTNEA VATAKPSLGI SRRQFMKHAG ITTGGIAAAS LLGTGMMRRA EAKDIPHDAP
IEIKRTVCSA CAVGCGLYAE VQNGVWTGQE PAFDHPFNAG GHCAKGAALR EHGHGEKRLK
YPMKLVDGKW KKLSWEQAFN EVGDKMQSIR QESGPDSLYF MGSAKFSNEG CYMYRKFAAM
WGTNNVDHSA RICHSTTVAG VANTWGYGAQ TNSFNDIQNA NAIFFIGSNP AEAHPVAMQH
ILIAKEKNNA KIIVVDPRFS RTAAHSDLHC ALRPGTDIPF IYGMLWHIFE NGWEDKAFIQ
QRVFEMDTIR EEVKKFPPQE VANITGVSEE QVYQAAKLMA ENRPGTVVWC MGGTQHHVGN
ANTRAYCILQ LALGNMGVSG GGTNIFRGHD NVQGATDLGL LFDTLPGYYG LKTGSWKHWS
HVWDLDFDWV KGRFDQNEYL GRIPMNTPGI PCSRWHDGVL ETPEKLAQKD RVRMAFFWGQ
SVNTETRQRE VRDALDKMDT VVVVDPFPTM AGVMHRRKDG VYLLPAATQF ETEGSVSNSG
RSQQWREKVI EPLFESKTDI EIMYRLSQKL GFDKEYTKRI AKDAKDMLVI EDITREINRG
MWTIGMSGQS PERLKLHTQN WGTFSNKTLE AEGGPAKGET YGLPWPCWGT PEQKHPGTQI
LYNTNKHVLQ GGGNFRARYG VEYQGKNLLA EGSFSKGSEI QDGYPEFSDK LLKQLGWWDD
LTAEEKAEAE GKNWKTDLSG GIQRVAMKHG CIPFGNAKAR CIVWTFPDQV PVHREPLYTP
RRDLVSKYPT YDDMQVHRLP TLYKSIQEKD TATKYPLGLT SGRLVEYEGG GEESRSNPWL
AELQQEMFVE IHPGDAADRG IRNGDTVWLE GAEGGRIKIK AMVTPRVKQG VTWMPYHFAG
VMHGESLENN YPEGTVPYVI GESANTALTY GYDPVTQMQE TKASLCQITK A
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