| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0061 |
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| Symbol | |
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| ID | 4923146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 73390 |
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| End bp | 74397 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640161573 |
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| Product | formate dehydrogenase, gamma subunit |
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| Protein accession | YP_001092193 |
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| Protein GI | 127510996 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
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| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTAA AATCACTGCG CAGCCTATTC ACTGTGTTGT TATTGCCATT GGTCTTGGCA
ATGGGCTTAG GCTTGACGAC GTCAGCCTAT GCCGTTGACG AACAGACCAG TCAACAGATG
GCAAATACCA GCGACGCTGA GCTATGGCGA GCCGTGAAGT CAGGAGACAA GGGATACACC
ACAGCCAAAG GCGCTGAGGG TGGGGTCATG ATTAACGTGT CGGCTATCGA AGGCACTAAC
GTTAAGAACG ACTATCTCAC CCCAGTGATG GCGCTGGCCG TTTGCGGTGT GTTCGGTGCT
TTCTTGATCT TCTATCTGGT GAATGGCCCT TCAAAGCTAA GTCATGGTTT CTCTGGCAAG
ATGGTATTGC GCTGGAGCAA GGCCGATCTT TGGATTCACT GGGTGATGGC GCTTTCCTGC
CTGGCGTTGA TCTTTACTGG TCTAAACATC ATGTTGGGTA AGCATGTGCT ACAGCCCTAT
GTGGGCACAG GCATTTGGGG CTCGCTGATC TACGGCAGCA AGACGATCCA CGATTACGCG
GGTCCCTTGT TCATCGTGGC CTGGGCTATC TGTGTGGTTA AATGGATGCC GTTGCAGACA
TTTAAGCTGT ATGACCTTAA GTGGTTCCTG GTGGTTGGTG GCTACATCAA CTTCGGACCC
TTCAAGGGCA AGCACCCAGA CAGTGGCTTC GCCAACGCCG GTGAGAAGAT GTGGTTCTGG
ACGCTAACCC TGTTCGGTCT GTTTATCGCG GTATCCGGTA TCATGCTGGT GATGCCTGCC
CTGGAACTGC CACGTGAAGC CTCTATGGCG GCACTGCTGG TTCACGGCCT CAGCGCCATC
ATCATCATCG CCTTTACTAT CGTCCACATC TGGATGGCGA CGGTACTGAG TGAAGGTGGT
ATGGAGTGCA TGAAGTCGGG TTACTGTGAT GAGAACTGGG CAGTACAGCA CCACAACCTT
TGGTACGATG AGATCAAAGA TAACGGTACC CTGACTTATA GGGACTAG
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| Protein sequence | MLLKSLRSLF TVLLLPLVLA MGLGLTTSAY AVDEQTSQQM ANTSDAELWR AVKSGDKGYT
TAKGAEGGVM INVSAIEGTN VKNDYLTPVM ALAVCGVFGA FLIFYLVNGP SKLSHGFSGK
MVLRWSKADL WIHWVMALSC LALIFTGLNI MLGKHVLQPY VGTGIWGSLI YGSKTIHDYA
GPLFIVAWAI CVVKWMPLQT FKLYDLKWFL VVGGYINFGP FKGKHPDSGF ANAGEKMWFW
TLTLFGLFIA VSGIMLVMPA LELPREASMA ALLVHGLSAI IIIAFTIVHI WMATVLSEGG
MECMKSGYCD ENWAVQHHNL WYDEIKDNGT LTYRD
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