| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0052 |
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| Symbol | |
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| ID | 4922606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 63788 |
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| End bp | 64693 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161564 |
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| Product | DNA binding domain-containing protein |
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| Protein accession | YP_001092184 |
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| Protein GI | 127510987 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1910] Periplasmic molybdate-binding protein/domain |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC CCAGCGAACT CGTCTACATG AGCGCCAAAC AGGTCGCCGA ATATCTCGAT
CTGAACGAGA AGAAGGTCTA CTCCATGGCC AACGACCGCA TATTGCCCGC CACCAAGGTG
ACGGGTAAAT GGTTGTTTCC CAAGATTTTG ATCGACCGTT GGGTCATGGA CTCCTGCCAT
AGCGGCATGC TGTCTGATCG CATGCATATC ACAGGCAGCG ACGATCCCCT GCTCTCCATG
TTGGTGGCCC GTCTCATGTC AAAGATAGGC AAGAGCGACT TGATTAGCTA CAGCTCAACC
GGCTCCCGCA TGGGGCTGGA TCTTCTGTCT CGCGGCTACG CCGACGTCTG TACCCTGCAC
TGGGGCAATG TGGAGGAGCG CAACATACGT CACCCGGCGT TGCTCAAGGG TTACCCCAAC
CACCAGCAGT GGGTGATGGT ACACGGCTAC ACCCGCCAGC AGGGGCTGAT GATGCGCAGC
GAGATGCACC ACAGATGCCA GGAAGAGGAG AAAGTGATCG GCCAGCCCTG GCGATGGGTC
GGCCGCCAAG CCGGTGCAGG AAGTCAGCAA CATCTGGAAC ACTGGCTGAT CAAGCAGGGG
GCCAGCATAG AGCAGCTCAA TCCGCAGATC ACCGCCTATA GCGAGCGTGA ACTTGCGGGC
TTCATCGCCC GCAACGAGGC CGACATCGGC TTCGGCTGTC AGTCGGTGGC GCTGGAGAGC
GGCCTGAGCT TCGTGCCTCT GGTGACCGAA TCCTTCGACT TCGTGATGCC TCAGGGGATC
TACTTCCGTC GTCAGCTCCA GGCCCTGTTC GAGATGCTCG GCAGCACCCA GACCCGCCAA
CTGGCGGCTC AGCTGGGGGG TTATGATCTC AGCCAGTGCG GCCAGATGTT GTGGACGGCC
CACTAA
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| Protein sequence | MTEPSELVYM SAKQVAEYLD LNEKKVYSMA NDRILPATKV TGKWLFPKIL IDRWVMDSCH
SGMLSDRMHI TGSDDPLLSM LVARLMSKIG KSDLISYSST GSRMGLDLLS RGYADVCTLH
WGNVEERNIR HPALLKGYPN HQQWVMVHGY TRQQGLMMRS EMHHRCQEEE KVIGQPWRWV
GRQAGAGSQQ HLEHWLIKQG ASIEQLNPQI TAYSERELAG FIARNEADIG FGCQSVALES
GLSFVPLVTE SFDFVMPQGI YFRRQLQALF EMLGSTQTRQ LAAQLGGYDL SQCGQMLWTA
H
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