| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0051 |
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| Symbol | |
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| ID | 4924400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 61803 |
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| End bp | 63692 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161563 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001092183 |
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| Protein GI | 127510986 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCAG AGTTAAACGA GATCCAAAAC TTCTTAAGCC AATATCCCCC GTTTAACGCC
CTGCCCGACG AGGTGGTCGC CATGGTGAGC CACCATGTGG AGATCGCCTA CTACCGCCAA
GACACCCCCA TCATCCACTT CGGCGATCAG ATCCATGACC TCTACATGGT GCGCAGCGGC
GTGGTAGAGG TCTACCGCCG CAAGGGCGAA CTCTATAACC GCCTGGACAG CGGCGATCTC
TTCGGCCAGA TGGGCCTGCT GACCAACAAC AAGGTACGCT TCCCGGTCAA GGCGATCGAG
GACACCCTGG TCTATTGCAT CCCTGAGGCG ATCTTCCAGC AGCTGTACGA TCAGTACGAC
ACCTTCGCCG ACTTCGTCGA GGTGGAGGAC AGCGCCCGGC TGCGCCAGAC GGTATCGAAC
ACCAGCGAAC AGAATGACCT GACCACCTCC AAGGTGAAGA CACTGCTCAC CCGCGATGCC
CCTGTGATCC ACAAGGGCGA AAGCATACAG CAGGCCGCCA TTATGATGGC CCAGGAGAAT
GTCTCTGCCC TCCTGGTGAT CGACCCAGAT GTCCTGGAGG ATGAGGACGG CGACACCAGC
CCGCTGCTTG GGATCATCAC AGACAGGGAT CTCTGCACCC GAGTCGTGGC CGAGGGGATA
GACCCGGCCA CCGAGCTGGC CGGCGTGGTA AGTACAGAGG TGATCACCCT AGATCATAAC
GCCTATGTCT ATGAGGCCAT GCTCACCATG CTGCGCTACA ACGTGCATCA TCTGCCGGTG
TGTAAGGGAC GCAAGCCGAT TGGCATCATC GAAGCCACGG ATATCGTCAG GTACGAATCG
CAAAACTCCC TGCTGCTGGT GAGCAGCATC TTCCAGCAAC AGAGTCTGGA GGAGCTGGCC
GCCCTCGCCA CCCAGGTCAA AGACAGCTTC GTGCGCCTGG TGAACGAAGA TGCCAACTCT
CATATGGTGG GCAGCGCCAT GTCGGTGATC GGCCGCAGCT TCAAGCAGCG GATACTCGAG
CTGGCGGAAG AGAAACTGGG GCCACCGCCC ATCCCCTACT GCTTCCTGGC GCTGGGCTCC
ATGGGCCGTG ACGAACAGCT AATCGTGACC GATCAGGACA ACGCCATCAT ACTCGACGAC
GACTTCGACA AGGCGAAGCA CGACGACTAC TTCAGCCAGC TGGCCAACTT CGTCTGCGAT
GGACTGGATA GCTGCGGCTA CAGTTACTGC ACCGGGGATA TCATGGCCAC CAACCCCATG
TGGCGCATGA CTCGCAAAGA ATGGGAGGCC TGTTTCGCCG ACTGGATAGA CGATCCAAAC
CCTAAGGCGC TACTGAATGC CTCCATCTTC TTCGATCTCG ACGGCGTCTA TGGCCGCCTC
AAGTGGGCCG AGCAGCTCAA CGGCTTCATC GTACGCAGGG CACGCAAGAA CAACCGTTTC
CTGGCCTGCC TCGCCCGCAA CGCCCTGAAT CGCACCCCGC CATTGGGTTT CTTCAAAGAT
TTCGTGATGG AAAAAGATGG CCGCCACAAC AACTCCATCA ACCTCAAGCG CCGGGGCACG
GCGCCGCTGG CGGACCTCAT TCGGGTACAC GCCCTGGCGG TGGGCTCCCG TGCACGCAAC
TCTTTCGAGC GCCTGGATGA CATCATAGAC GCCAACATAC TGCCCAAGGG GCGCGGCGAG
GATCTGCGGG ACGCCATGGA GTTCATCTCC ATGGTGCGCA TCCGCCATCA GGCCTTAGAT
GTTGAGCAGG GAATCGATCC CGACAACAAC ATAGAGCCAG AGCACCTGTC GGATTTCGAG
CGCCGCAACC TCAAAGATGC GTTTCAGATC TTGAGTAACG CCCAGAACTT CCTCAAGTTC
CGCTACAACG CCAGCAACCA GTTTAAGTGA
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| Protein sequence | MEAELNEIQN FLSQYPPFNA LPDEVVAMVS HHVEIAYYRQ DTPIIHFGDQ IHDLYMVRSG
VVEVYRRKGE LYNRLDSGDL FGQMGLLTNN KVRFPVKAIE DTLVYCIPEA IFQQLYDQYD
TFADFVEVED SARLRQTVSN TSEQNDLTTS KVKTLLTRDA PVIHKGESIQ QAAIMMAQEN
VSALLVIDPD VLEDEDGDTS PLLGIITDRD LCTRVVAEGI DPATELAGVV STEVITLDHN
AYVYEAMLTM LRYNVHHLPV CKGRKPIGII EATDIVRYES QNSLLLVSSI FQQQSLEELA
ALATQVKDSF VRLVNEDANS HMVGSAMSVI GRSFKQRILE LAEEKLGPPP IPYCFLALGS
MGRDEQLIVT DQDNAIILDD DFDKAKHDDY FSQLANFVCD GLDSCGYSYC TGDIMATNPM
WRMTRKEWEA CFADWIDDPN PKALLNASIF FDLDGVYGRL KWAEQLNGFI VRRARKNNRF
LACLARNALN RTPPLGFFKD FVMEKDGRHN NSINLKRRGT APLADLIRVH ALAVGSRARN
SFERLDDIID ANILPKGRGE DLRDAMEFIS MVRIRHQALD VEQGIDPDNN IEPEHLSDFE
RRNLKDAFQI LSNAQNFLKF RYNASNQFK
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