| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0050 |
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| Symbol | |
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| ID | 4923584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 61076 |
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| End bp | 61795 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640161562 |
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| Product | DNA polymerase III subunit epsilon |
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| Protein accession | YP_001092182 |
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| Protein GI | 127510985 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA AGCTATTGTC ACCGCCGAGC ATCGACTGGC CGGGTAAGTT TGAGCAGCGG
CTCAAGACCA CGGAACATCA GGGGTTACGC CAGTATTATC TGGGCGGCCT GCCGGATCCC
GACACGCCAC TGGCAGAGGT CGAGCTGCTG GCGATGGACT TCGAGACCAC GGGCCTGAAC
GTCGATAAGG ATGATATCGT CAGCATAGGC ACTGTGCCCT TTACACTTCG GCGCATCTTT
CTCAACCGTG CCCAGCACTG GACCGTCAGA CCCAGAGAAC AGCTGGCCGA GGAGTCGGTG
ATCATCCACG GCATCACCCA CAGCGACATA CTGGACGCGC CGGATCTCTC CGCCATTTTC
GAACAGGTGC TGGAGCAGAT GGCGGGCAAG ATCATGGTGG TGCACTATCA AGCGATAGAA
AGATTATTCC TGGAGCGGGC ACTGATCCGC CGCATCCATC AGGGGATAGA GTTTCCCCTG
ATAGATACTA TGGCGCTGGA ATCAGAGATA CAGAAGCGCC AGCATGGCGG CTTGCTACAG
CGCCTCAAGG GCGACAAGCC GGGCTCGGTG CGATTGGGTC AGAGCCGCTC CAGATACGGC
CTGCCCAGCT ATCCGCCCCA CAACGCCCTG ACCGACGCCA TCGCCACCGC CGAGCTGCTG
CAGGCGCAGA TCGCCCATCA CTTCGACCCC AGCCGTCCCA TCAAAGAGTT CTGGTGCTAG
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| Protein sequence | MLKKLLSPPS IDWPGKFEQR LKTTEHQGLR QYYLGGLPDP DTPLAEVELL AMDFETTGLN
VDKDDIVSIG TVPFTLRRIF LNRAQHWTVR PREQLAEESV IIHGITHSDI LDAPDLSAIF
EQVLEQMAGK IMVVHYQAIE RLFLERALIR RIHQGIEFPL IDTMALESEI QKRQHGGLLQ
RLKGDKPGSV RLGQSRSRYG LPSYPPHNAL TDAIATAELL QAQIAHHFDP SRPIKEFWC
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