| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0044 |
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| Symbol | |
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| ID | 4920904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 51810 |
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| End bp | 54920 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640161556 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001092176 |
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| Protein GI | 127510979 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCA CCAAATTAAG CACCAATAAC CCTGCCGGTA CCCTAGTGGC CCTGCTGCTG
ATTGCCATAT TCGGCGTGTT AGCCATAGGC AAGCTGCCGA TCCAGCTGCT GCCGGACATT
CAACGGCCGC AGATCTCCGT CTTCAACAAT TGGCGCTCGG CGGCGCCCCA GGAGATGGAG
TCCAACATCA TAGAGCCCCA GGAAAATGTG TTGCGCCAGG TGCCCGGCGT GGTTGAGATG
ACCTCCAACA TCTCCCAGGG CTTTGGCGGC ATTACACTGA CCTTCGAGGT GGGCAGCGAC
ATGCAGGCGG GGATGATCAA TGTGATCAAC GCGCTCAATC AGACTCCCCC CAGGCCGCTG
GATGCCAATG AGCCATTCAT CAATGTCGGC GGCGGTAACG GCGCACCCAA CCTGGCCTCC
CTGTTGATCC GCATGGCGCC GGACAATCCG GCTACCGACT TCGCCCAGTA TCAGAAGCTG
ATCGATGATG TGGTGGAGCC CAGACTGAGG CTGATCTCAG GCGTAGGCTC GGTGCGCCTG
CAGAGTCGCT TGCCGAAAGA GTTACATATC GAGTTCGACC CCTATCGCGC CGCGGCGCTG
GGGATCACTC TGGATCAACT GCGCAGCACA CTTTCGCGGG CGGCGGATAT TTCGGGCGGC
ACCGCCAATG TGGGTCGTCG CCAATATACG GTGCGTTTCA TCGGCCAATA CACGCCGGAG
AATCTGGGCA ATCTCATCGT CACCTACAAC GAGGGGCGTC CCATCTACCT CAACGAGCTG
GCGGATGTGG AAGTATCGAG TGCCGATGTG CAGGGTTTTA CCAAGCGTAA CGGCTATCCT
GCCTACTATA TGACGGTGGA GGGCACCTTC GATGCCAATA CGGTTAAGGT GCTCGATGGC
GTCAACGAGG CGATTGCCGA GCTTAATCAG GGGCCGCTGA AGGAGGCGGG GTTGGTGTTG
GATCTCTCCT TCGACGCCTC TGTGCATATC AAGCGGGCTA TCTGGTTGGT GAAGGGCAAC
CTGGCGATCG GTGTGGTGCT GGCACTGGTG ATCCTCTATG CCTTCCTGCG CAGCTTCCGC
GCGACCCTGA TGATCGCCTC GACTATTCCC GTCGCCCTGC TGATCGCCTT CTTCTTCCTC
GAGATGATGG GACGTACCCT GAACGTGATC TCCCTGGCGG GCCTGGCCTT CGCCGTCGGC
CTGGTGCTGG ATGCTGCCAT CATAGTGCAG GAGAATATCG TGCGCATCCT GCAGCAGGGG
ACGCCGATCC GCGAGGCCAT CGCCAAGGGC ACAGATCAGG TCAAGGGCGC CTTGTTGGCC
TCCACCGCCA CGACGGTCGC CATCTTCCTG CCGATCCTAT TTATGCCCGG GGTGGAGGGG
CAGCTGTTTT CTGATCTGGC GCTCACCCTG TCGGTGGCCG TGGTCTCCTC CTTTATCAGT
GCCATCACCC TGATCCCGGT ATTTAGTCTG CTCTGGCTCA AGCTCTCACC CCAGGATGAT
GGCCAGCAGA GCGGCCGCCT GTGGCGCTGG ATATCGGCAA CCGTGCAGCG CCTCACCGGT
GACACCAAAC GCGCCGTCTT CTGGTGTGTC ACCCTGATCC TAGGAGCCGC CATGCTGACG
GCGGTCCTGA TGCCGAGACC CGACTTTTTG CCCCAGGCGC GCTCGGACGG CATATTTGCC
TTCTTTGCCC TGCCACCGGG TGCAAACGTC AAGACGCTGG AGAAGGAGGT GGGCGATGTG
ATCATAGAAC GCCTCAAGCC ATACTATGAC AAGGAGAAGC AGCCCTATAT CAAGGGATAT
AACTTCTCCA TGTACAGCGC CTTCAACGTG CTGTTTATCT ATCCTGAAGA TCCGTCCCAG
GCCGATGCCA TGATAGAGCT GCTCAACAAG GAGATCTTGG TGGGACTGCC CGATACCCAG
GCCTTTACCA ACCGCGGCTC CCTGCTGCAG TTTGGCTTTA ACGGCGGTCG GGCGATCAAT
ATCGACCTCC AGGGGGCCGA CATGGAGGCC CTGATGGAGA CGGCAGGCAA GGGAATGGGA
CTGATCCAAG AGGCGCTGCC CGGCGCCGTG GTTAGGCCGA TTCCAGGCCT CTCCATGGCA
CAACCCGAGC TGCAGTTGAT CCCCAACGAG CGCCGCTTGG CCCAGGCTGG TGTCGACCGG
ATTCAGATAG CCAACGCCAT TCGCGCCTAC ACCTCTGGCT TGTTTGTGGG TGAGTATTTC
GACGGTAACG AACGCATGGA TGTGCTGCTC AAGGGGCCCA AGTGGCAGGT GCCCGAGCAA
CTATCGGCGA CTCCTGTCTA TACCCAGGCC GCCGGTATTC AGACCATAGG CGAGCTGGCG
ACCCTCAAGC GAACTGTGGG GCCAACCCAG CTGCAGCGAG TCAATGGCAA GCGCAGCGTC
AGCCTGTTGA TCTTCCCGCC AGCGGATATG TCCCTGGATG AGGCGCTGGA GAAACTCAAC
CAGTCGGCGG TACCAACCCT GAGAGCCAGC CTGCCGGAAA ACAGCTCACT CGGGTATCGT
GGCAGCGCCG ACAAGCTCGA CAGTACCATC AAGGATATGG GCGCCAACTT CGCCCTGGCC
GTGGTGATCC TCTTCCTCTT GATGGCCGCC ATGTTTAAGT CGGCCAAGGA TAGCCTGCTA
GTCTTGCTCT CTATGCCGCT GGCGATCTGT GGCGGTGTGG TCAGCCTGCG ACTGCTAAAC
TTGTTTAGTT TCCAGAGCCT GGATCTGCTG ACCATGATAG GTTTCATCAT CTTGCTGGGG
TTGGTGGTCA ATAACGCCAT CCTGCTGGTG GATCAGACCC GCCAGAGTTA TCGCGAGACG
CCGGATATCG ACCTGGCCAT CGCTCAGGCC GTGGCGACCC GTGCCCGCCC TGTGTATATG
AGCACCCTGA CCTCCATCTT CGGCATGCTG CCGCTGATGC TGGTGCCCGG CGTCGGCAGC
GAGATCTATC GCGGCCTGGC GGCGGTTATC GTCGGCGGCA TGACCTTTAG CGCCTTGTTT
ACCCTTATTT TGATGCCCAG CCTGTTGCGT CTGACCCATA GGCTGAGCCC AGTTACCAAT
AGGCTGGCCG ACGAGCCAGC CCTCTCATCC ACCACAGGAG TGAAGTCATG A
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| Protein sequence | MNLTKLSTNN PAGTLVALLL IAIFGVLAIG KLPIQLLPDI QRPQISVFNN WRSAAPQEME
SNIIEPQENV LRQVPGVVEM TSNISQGFGG ITLTFEVGSD MQAGMINVIN ALNQTPPRPL
DANEPFINVG GGNGAPNLAS LLIRMAPDNP ATDFAQYQKL IDDVVEPRLR LISGVGSVRL
QSRLPKELHI EFDPYRAAAL GITLDQLRST LSRAADISGG TANVGRRQYT VRFIGQYTPE
NLGNLIVTYN EGRPIYLNEL ADVEVSSADV QGFTKRNGYP AYYMTVEGTF DANTVKVLDG
VNEAIAELNQ GPLKEAGLVL DLSFDASVHI KRAIWLVKGN LAIGVVLALV ILYAFLRSFR
ATLMIASTIP VALLIAFFFL EMMGRTLNVI SLAGLAFAVG LVLDAAIIVQ ENIVRILQQG
TPIREAIAKG TDQVKGALLA STATTVAIFL PILFMPGVEG QLFSDLALTL SVAVVSSFIS
AITLIPVFSL LWLKLSPQDD GQQSGRLWRW ISATVQRLTG DTKRAVFWCV TLILGAAMLT
AVLMPRPDFL PQARSDGIFA FFALPPGANV KTLEKEVGDV IIERLKPYYD KEKQPYIKGY
NFSMYSAFNV LFIYPEDPSQ ADAMIELLNK EILVGLPDTQ AFTNRGSLLQ FGFNGGRAIN
IDLQGADMEA LMETAGKGMG LIQEALPGAV VRPIPGLSMA QPELQLIPNE RRLAQAGVDR
IQIANAIRAY TSGLFVGEYF DGNERMDVLL KGPKWQVPEQ LSATPVYTQA AGIQTIGELA
TLKRTVGPTQ LQRVNGKRSV SLLIFPPADM SLDEALEKLN QSAVPTLRAS LPENSSLGYR
GSADKLDSTI KDMGANFALA VVILFLLMAA MFKSAKDSLL VLLSMPLAIC GGVVSLRLLN
LFSFQSLDLL TMIGFIILLG LVVNNAILLV DQTRQSYRET PDIDLAIAQA VATRARPVYM
STLTSIFGML PLMLVPGVGS EIYRGLAAVI VGGMTFSALF TLILMPSLLR LTHRLSPVTN
RLADEPALSS TTGVKS
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