Gene Shew_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0036 
Symbol 
ID4920462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp41568 
End bp42389 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content59% 
IMG OID640161548 
Productphosphoesterase, PA-phosphatase related 
Protein accessionYP_001092168 
Protein GI127510971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAC TGACCCAGGC TCAGACCACC AGAGAAACAG CCCTGACGAT GACCACAGAT 
CGCAGCCGCT ACGGCACGCT GATCCTACTG GTCAGCATGC TGGCGCTGCT CTGCCTGAAT
CAGGATCTCA ACCTGAGCCT CTTTCGTGCC ATCAACGGCC TCTCACCTAG CCTGCCCCAG
TGGCTACAGC TAGGGATAAC CGATCTCGGC CACGGCAGCA CCCTAGGCAC TATCGTACTC
ATCTGTCTGC TGCGTCGCCC CGAGCTGATG CCGCGGGTAC TGACCGCCAG CCTGCTGTCG
ATGATCTTGG TCCCGCTGCT AAAACAGTAT TTCGATGCCC CCAGACCGGC GGCAACCCTG
GATTTTCTCT ATATCGTCGG CGAGACGCGT CTGCACCACA GCTTTCCCTC TGGCCATAGC
ACCAGTGCCT TCCTGTTCGC CGGTAGCTTG CTGATGGTAA TGCAGGATAA GAAGAGTAAG
TGGGTCCTGT TGATGGGGGC GGCCATGGTG GCGCTGTCAC GCATCTTGGT CGGCGCCCAT
TGGCCGGTAG ACACGCTGGC GGGCGCCCTG TTGGGATTAA GCTGCGCCTA TGTCGCCTCC
TATGTTCCCC TGGTGCATTT GTCGCCAAGG CACTGGAAAA TCCTGATGGG CATCTTGCTG
CTAACGCTGC TGGTATGCCA GTACAAGGAG ACCTCTTCGC AGATGGCCTG GCAGATCATT
GGCCTTCGTT GGGGACTCCT GCTGCTAGCC GGCGTGCTGG TGCTTCGCCA ATACCTGCAG
TCTCGCCAGC CGCTCACCCC GCGTAAGTGG GTCAGAGCCT AA
 
Protein sequence
MFRLTQAQTT RETALTMTTD RSRYGTLILL VSMLALLCLN QDLNLSLFRA INGLSPSLPQ 
WLQLGITDLG HGSTLGTIVL ICLLRRPELM PRVLTASLLS MILVPLLKQY FDAPRPAATL
DFLYIVGETR LHHSFPSGHS TSAFLFAGSL LMVMQDKKSK WVLLMGAAMV ALSRILVGAH
WPVDTLAGAL LGLSCAYVAS YVPLVHLSPR HWKILMGILL LTLLVCQYKE TSSQMAWQII
GLRWGLLLLA GVLVLRQYLQ SRQPLTPRKW VRA