Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0034 |
Symbol | |
ID | 4920480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 39701 |
End bp | 40504 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640161546 |
Product | methyltransferase type 12 |
Protein accession | YP_001092166 |
Protein GI | 127510969 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGCG CAGTGGATTA TCTGACCCTA AATCGAACGG CCTGGAATCA CAGGACCCTA GAACATCTAG ACTCTAGCTT CTACGATGTA AGTGGCTTTC TCGCCGGCAA CAGCTCGCTG CAGGAGATAG AGCTAGCCGA CCTTAAGGTA AAGGGAAAAA GCCTACTGCA CCTACAGTGC CATTTCGGCC TGGACACTCT CTCCCTGGCT CGCCTCGGCG CCGAGGTCAC TGGCGTGGAT CTCTCCGACA CCGCCATCCA TCATGCCAGG CGACTGGCCG AGGCCTGCGA CCTTAAGGCC GACTTTATCT GCAGCGATCT CTACCAAGCG GGCACGCAGC TGCAGCAGCA GTTCGATATG GTCTACACCT CCTATGGCGC CCTCTGCTGG CTGCCGGATC TAGGTCGTTG GGCAGAGTTG ATTTATGAGT CGCTGCTACC CGGTGGTGAG TTTTATATGG TGGAGTTTCA TCCCGTGCAG GCAATGATGG AGGGTTACAG TTATTTTACC CAGCAGGAGC CGGATGTTGA GGAGGAAGGC ACCTATACGG AAAACGCCAG CGACACCAAA CACACCATGG TGACCTGGCC CCACTCCCTG GCCGATGTGA TAGGGGCGCT CATCCAAGCC GGACTCAAGG TAGAGGCGAT TCAGGAGTAT CCCTTCAGCC CCTATGATGC CTTCGACAAT CTGGTGACGG GAGAGAGCCT AGGGCTCTCA AGCGACAGGC CCAGGTATTA TCAGCTACAT CAGGGCAAGC CGATCCCTAT GGTCTACAGC CTGTCGGCCC GTAAACCTGA GTAA
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Protein sequence | MRRAVDYLTL NRTAWNHRTL EHLDSSFYDV SGFLAGNSSL QEIELADLKV KGKSLLHLQC HFGLDTLSLA RLGAEVTGVD LSDTAIHHAR RLAEACDLKA DFICSDLYQA GTQLQQQFDM VYTSYGALCW LPDLGRWAEL IYESLLPGGE FYMVEFHPVQ AMMEGYSYFT QQEPDVEEEG TYTENASDTK HTMVTWPHSL ADVIGALIQA GLKVEAIQEY PFSPYDAFDN LVTGESLGLS SDRPRYYQLH QGKPIPMVYS LSARKPE
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