| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0033 |
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| Symbol | |
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| ID | 4920489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 37798 |
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| End bp | 39639 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161545 |
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| Product | peptidase M14, carboxypeptidase A |
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| Protein accession | YP_001092165 |
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| Protein GI | 127510968 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2866] Predicted carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTAT ATTCTCGCGC TACGCTCCTC TGTCTCGCCA CCTTCGGCGC ATCCGCCATG
GCAGAGACCA GCGGCCCTCA ACCGGCCCAA GTCTCGTTAA ATAAGACTTA TATCAATGAT
GCCATCTTGC CGCCGAGCAT CACCTGGCAC GGCGCCAGCG AAGCCTTGCT GCGCGCGGCA
GATGACCCTT GGGCGACCCC CTTCGAGCAG GGCGGCCTAA AGTCCAGCCC CAGCTATGAC
GACACCTTCG CCTGGCTGGA TAAGCTGCTC GCCACCAGCG ATAAGCTCCA CAAGGTTTCC
TTGGGTAAGA GTCCTCAGGG GCGAGATATC TGGATGATAG TGGCGAGCCA GGAGGGGGCA
GCGACCCCCG ATGAACTGCA GGTCAATGGT AAGCCAACAC TCTTGGTGCA GGCGGGGATC
CACTCGGGCG AGATAGATGG CAAGGATGCG GGCATGATGT TGCTGCGCGA CATGGTGATG
GGAGACAAGC AGGCGCTGTT AACCGGTGCG AACCTCCTCT TCGTGCCTAT CTTCAGCGTC
GATGCCCACG AGCGCAGCGG CCAGTTTAAC CGGGTTAACC AGAGGGGCCC GGTGGAGATG
GGCTGGCGCA CTACGGCCAA GAATCTTAAC CTTAATCGCG ACTATGCCAA GGCAGATACC
CTGGAGATGC AGCATATGTT GGCGGCAATT AACCTTTGGC AGCCGGATCT CTATATCGAT
GTGCATGTCA CCGACGGCAT AGATTATCAA TATGATGTCA CCTTCGGCTA TAACCTGGCT
CAGGGACTGA GTCCCGCCAG CTATCGCTGG CTCAACGACA AGTATCGTCC CAAAGTCGAG
CAGGCGCTCA GCGCCCAGGG ACATGTGCCC GGCCCCTTGG TGTTTGCCAT CGATAATCGC
GACCTGAACC AGGGGCTCTC CCTGTGGAAT GCCAGCCCAC GCTACTCCAA CGGTTATGGC
GACGCCCGTC ATCTGCCCAC CATATTGATC GAGAATCATA GCCTCAAGCC CTTCAAGCAG
CGAGTGCTCG GCACCTATTT GATGCTGGCC TCGACCCTGG AGGTGTTAGG CGAGCAGGGC
ACGGCGCTGC GCAGCGCCAT CAAGCAGGAC AGCTATCGCT ACAGCGACCG CATCACACTG
ACCTGGCAGT CGGAGACCCA GCCTAAGGGG TGGGACTTCA AGGGGATAGA TTATCGCCTG
GAGCAGAGCC CCATTAGCGG CGAGACGGTC GTGCGCTGGA CCGGCGAGCC CAAGCTGTAC
GAGAACCTGC CCGTGATAGG TAAGACACGC GCAGACATTA AGGTGAATCG TCCAAAGGCC
TACTATATTC CGCCTCAGTG GCAGGAGGTG ATCGAGCGTC TGAGCATTCA TGGCATACGC
ATGACGCGCC TGGAGCAGTC CAAGACTCTT ACCCTGACTC AATATCGATT CGGTGAGCCT
GCGTTCGACG CCAAGGACTA CGAGGGACGC CAGCGGGTCT CAGCCCCTGT GTCGAGCCAC
AAGGCTAAGG TGGCGCTGCC GGCGGGCACG GTGAAGATCA GCACTCAGCA GCCCCTCGGC
GATCTGGCTA TCCTCTTGCT GGAGCCGCAG TCACCCGACT CGCTGCTGCA GTGGGGCTTC
TTCAATCCTA TCTTTACCCG CACCGAATAT ATCGAGCACT ACGCGGTAGA GCCGCTGGCG
GTAAAGATGC TCAAGGAGGA CGCATCCCTG GCCGCCGAGT TTGAGGCGGC GCTCAAGGAT
CCTGAATTTG CCAAGGATGC CGAGGCGAGA CTGCGCTGGT TCTACGAGCG TAGCCCCTAT
TTTGATAAGC AGTACAGGGT CTATCCCGTA CTGAGAGACT AA
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| Protein sequence | MSLYSRATLL CLATFGASAM AETSGPQPAQ VSLNKTYIND AILPPSITWH GASEALLRAA
DDPWATPFEQ GGLKSSPSYD DTFAWLDKLL ATSDKLHKVS LGKSPQGRDI WMIVASQEGA
ATPDELQVNG KPTLLVQAGI HSGEIDGKDA GMMLLRDMVM GDKQALLTGA NLLFVPIFSV
DAHERSGQFN RVNQRGPVEM GWRTTAKNLN LNRDYAKADT LEMQHMLAAI NLWQPDLYID
VHVTDGIDYQ YDVTFGYNLA QGLSPASYRW LNDKYRPKVE QALSAQGHVP GPLVFAIDNR
DLNQGLSLWN ASPRYSNGYG DARHLPTILI ENHSLKPFKQ RVLGTYLMLA STLEVLGEQG
TALRSAIKQD SYRYSDRITL TWQSETQPKG WDFKGIDYRL EQSPISGETV VRWTGEPKLY
ENLPVIGKTR ADIKVNRPKA YYIPPQWQEV IERLSIHGIR MTRLEQSKTL TLTQYRFGEP
AFDAKDYEGR QRVSAPVSSH KAKVALPAGT VKISTQQPLG DLAILLLEPQ SPDSLLQWGF
FNPIFTRTEY IEHYAVEPLA VKMLKEDASL AAEFEAALKD PEFAKDAEAR LRWFYERSPY
FDKQYRVYPV LRD
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