| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0020 |
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| Symbol | |
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| ID | 4920935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 23495 |
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| End bp | 24817 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640161532 |
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| Product | proline dipeptidase |
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| Protein accession | YP_001092152 |
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| Protein GI | 127510955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00930691 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACT TAGCCACCCT CTATCCCGCC CACATTATTG AACTGAACCG GCGCGTCGCC
GAGATCACCG CAAGAGAGCA GTTGGCCGGC TTAGTGATTC ATTCGGGTCA GCCTCATCGT
CAGTTTCTCG ATGATCTGGA TTACCCCTTT AAAGTTAATC CGCACTTCAA GGCCTGGCTT
CCGGTTATCG ATAATCCCCA CTGCTGGCTG ATCGTCAACG GTCGGGATAA GCCGCAACTC
ATCTTCTATC GTCCGGTGGA TTTTTGGCAT AAGGTCGCCG ATCTACCAGA GGATTTTTGG
ACGACCGAGA TAGAGATTAA AGTGCTGACC AAGGCCGACA AGGTGGCAGA TCTGCTGCCG
GGCAAGTTGC AGGAGTGGGC CTATATTGGC GAGCATCTGG ATGTCGCCGA TGTGCTGGGC
TTCGGAAGCC GTAACCCCGA GGCGGTGATG AGCTACCTGC ATTATCACAG AGCCAGCAAG
ACGGCCTATG AGTTGGCCTG CATGCGCCGG GCGAGTGAGA TCGGTGTGCG TGGTCATGTG
GCGGCCAAGA GTGCCTTCTA TGCGGGCGCG AGCGAGTTTG AGATCCAGCA AGCCTACCTG
GCTGCGACTG ATATGGGCGA GAACGATGTG CCCTACGGCA ACATTATCGC ACTGAATCAA
AACGCCGCGA TTCTGCACTA CACGGCGCTG GAGCATGTGT CGCCCAAGCA GCGACTCTCC
TTCCTTATCG ATGCCGGTGG TAGCTTCCAT GGCTATGCCT CGGACATCAC CCGTACCTAT
GCCTTCGAGA AGAACCTGTT CGGCGACCTG ATCGCCGCCA TGGACAAGTT ACAGCTGGCC
ATCATCGAGA TGATGCGTCC GGGCGTGAAG TATGTAGATC TGCATCTGGC GACACACCAG
AAGCTGGCAC AGCTGCTGCT GGACTTCAAG TTAGTGCAAG GCGATCCCCA AGGACTGATA
GAGCAGGGGA TCACCAGCGC CTTCTTCCCC CATGGTCTGG GGCATATGTT GGGCCTACAG
GTACATGATA TGGGCGGCTT CCTCCACGAC GAGCGCGGCA CCCACATTGC ACCGCCGGAG
GCGCATCCCT TCCTGCGCTG TACCCGCACC CTGGCCGCTA ACCAGGTGCT GACCATAGAG
CCAGGGCTTT ACATCATCGA CAGCCTGCTT AACGAGTTGA AACAGGATGG TCGCGCCGAT
TGGATTAACT GGCAGATGGT GGATCAGGTG CGCCCCTTCG GTGGCATTCG TATCGAAGAC
AATGTGATCG TCCATAGCGA TCATAACGAA AATATGACTC GCGATCTGGG TCTGCACGGT
TAA
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| Protein sequence | MENLATLYPA HIIELNRRVA EITAREQLAG LVIHSGQPHR QFLDDLDYPF KVNPHFKAWL
PVIDNPHCWL IVNGRDKPQL IFYRPVDFWH KVADLPEDFW TTEIEIKVLT KADKVADLLP
GKLQEWAYIG EHLDVADVLG FGSRNPEAVM SYLHYHRASK TAYELACMRR ASEIGVRGHV
AAKSAFYAGA SEFEIQQAYL AATDMGENDV PYGNIIALNQ NAAILHYTAL EHVSPKQRLS
FLIDAGGSFH GYASDITRTY AFEKNLFGDL IAAMDKLQLA IIEMMRPGVK YVDLHLATHQ
KLAQLLLDFK LVQGDPQGLI EQGITSAFFP HGLGHMLGLQ VHDMGGFLHD ERGTHIAPPE
AHPFLRCTRT LAANQVLTIE PGLYIIDSLL NELKQDGRAD WINWQMVDQV RPFGGIRIED
NVIVHSDHNE NMTRDLGLHG
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