Gene Shew_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0015 
Symbol 
ID4921266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp18184 
End bp18429 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content55% 
IMG OID640161527 
Productsulfur transfer protein SirA 
Protein accessionYP_001092147 
Protein GI127510950 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0331062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.432402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC CTTTCGCACA AGCACAACAC CAACTCGACG CCCTGGGACT ACGTTGTCCC 
GAGCCTGTGA TGATGGTGAG AAAATCGGTG CGCAAGATGA ACGAGGGAGA GACCCTGCTG
ATCATCGCCG ACGACCCGGC GACCACACGT GACATTCCCA GCTTCTGCGA GTTTATGGAT
CACACCCTGA TCGCCAGCCA GACCGAGTCG ACGCCTTATC AATATCTGAT CAAGAAGGGT
CTCTAA
 
Protein sequence
MSDPFAQAQH QLDALGLRCP EPVMMVRKSV RKMNEGETLL IIADDPATTR DIPSFCEFMD 
HTLIASQTES TPYQYLIKKG L