| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_18701 |
|---|
| Symbol | |
|---|
| ID | 4910909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | + |
|---|
| Start bp | 1595858 |
|---|
| End bp | 1597171 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640161475 |
|---|
| Product | ATP-dependent DNA ligase |
|---|
| Protein accession | YP_001092094 |
|---|
| Protein GI | 126697208 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1793] ATP-dependent DNA ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.570895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTAAAG AAGAAATAAT ACATCAATTA GAATTACACC CAAGTAGATT AGATAAAGAA
AAAATCATCT CAGAAGCAAT GGAAGATGGT CTAGATGATT TTTTTGAAGG TATACGTATG
GCACTTGATC CATTGGTAAC TTTTGGTGTA AAAATTGTCC CTGAGAAAAA GACTGAAAAA
AGTCAAAATT TTTTATGGCA AGATTTTAGG AAATTAGCCA ATAAGCTTAT TCAAAGAGAA
CTTACTGGTC ACGCTGCTCG CGATGCAATT CTTACAGCTA TGGAATTAGC AACAAAAGAA
GAGTGGAATG GATTTTATAG ACGAGTTTTA ATTAAAGATC TTAGATGTGG TGTATCTGAA
AAAACAATCA ACAAGATAGC AAAAAAATTT CCCAAATATG CTATTCCTAT TTTTTCTTGT
CCTTTAGCTC ATGACAGTGC AAATCACGAA AAAAAAATGA TAGGAAAAAA GCAAATTGAA
ATCAAATTAG ATGGAGTACG CGTCTTAACC ATTATTAGAC AAAATAAAGT AGAAATGTTT
TCTCGTAATG GGAAACAATT CCATAATTTT GGTCATATTA TTTCAGAAAT AGAAAATGCT
TTAAAAGAAG ACCCAGCACC TTATGACTTA GTACTCGATG GTGAAGTGAT GAGCGCTAAC
TTTCAAGATT TAATGAAACA GGTACATAGA AAAGATGGCA AACAAACTAA AGACGCAGTT
CTCCACCTAT TTGACTTATG TCCCCTTGAA AACTTTCAAA AAGGGAGATG GAACACTAGT
CAAACAAAAA GAAGTTTATT AGTAAAAGAA TGGGTAGCAA AACATTCTAT GCTTCTAAAA
CATATACAAA CACTTGAATG GGAAAATGTA GATCTCGACA CTATTGAAGG ACAAGAAAGA
TTTGTAGAGC TGAATAAATC TGCTGTAGAA GGTGGGTATG AAGGAGTAAT GATTAAAGAT
CCTGATGCTA TGTATGAATG TAAAAGAACA CACAGTTGGT TAAAAGCAAA ACCTTTCATT
GAAGTCACTT TAAAAGTTGT ATCGGTTGAG GAAGGTACAG GTCGCAACAA AGGGAGACTG
GGGGCAATCC TGGTAGAAGG AGAAGATGAT GGGTATGAAT ACAGTCTTAG TTGCGGAAGC
GGATTTAGTG ATATCCAACG AGAAGAATAT TGGTCTAAAC GTAATCATCT TGTTGGTCAA
CTTGTAGAAA TCAGAGCTGA TGCAAAAACC AAATCAAAGG ATGCAGTGGC TTTTAGTCTT
AGGTTTCCTA GATTTAAATG CTTTAGAGGA TTTAAAGATG GAGAAAAAGT TTAA
|
|---|
| Protein sequence | MFKEEIIHQL ELHPSRLDKE KIISEAMEDG LDDFFEGIRM ALDPLVTFGV KIVPEKKTEK
SQNFLWQDFR KLANKLIQRE LTGHAARDAI LTAMELATKE EWNGFYRRVL IKDLRCGVSE
KTINKIAKKF PKYAIPIFSC PLAHDSANHE KKMIGKKQIE IKLDGVRVLT IIRQNKVEMF
SRNGKQFHNF GHIISEIENA LKEDPAPYDL VLDGEVMSAN FQDLMKQVHR KDGKQTKDAV
LHLFDLCPLE NFQKGRWNTS QTKRSLLVKE WVAKHSMLLK HIQTLEWENV DLDTIEGQER
FVELNKSAVE GGYEGVMIKD PDAMYECKRT HSWLKAKPFI EVTLKVVSVE EGTGRNKGRL
GAILVEGEDD GYEYSLSCGS GFSDIQREEY WSKRNHLVGQ LVEIRADAKT KSKDAVAFSL
RFPRFKCFRG FKDGEKV
|
|---|
| |