Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_18301 |
Symbol | secA |
ID | 4911212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 1550714 |
End bp | 1553545 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640161434 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_001092054 |
Protein GI | 126697168 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAAC TTTTGTTGGG AGACCCGAAT ACACGAAAGT TAAAGCGCTA TCAACCAATA GTGGAAGAGA TAAATTTTTT AGAAGAAGAA ATTTCTCAAT TGACTGATGA TGAGCTGAGA AAAGAAACTC AAAATCTTAA ATCAACTATT TCAGCAGAAT TAGATTTAAA AAAACAAAAA GAACTCCTAG AAGAATTTCT TCCTAAAGCC TTTGCAATCG TGAGAGAAGC AAGTAAACGT GTTCTCGATA TGAGACATTT TGATGTTCAG TTAATAGGCG GGATAGTTTT AAATGAGTGT CAAATTGCTG AGATGAAGAC TGGAGAGGGA AAAACTCTTG TCGCAACATT ACCTTGTTAT CTAAATGCTC TTACTGGAAA AGGTGTTCAT GTTGTTACGG TAAATGATTA TTTAGCTCGA AGAGATGCAG AGTGGATGGG ACAAGTTCAT CGTTTTTTGG GTTTATCAGT TGGTTTGATT CAGCAAGATA TGAATCCACT TGAGAGGAAG AAAAATTATG ATTGTGATAT AACTTATGCC ACAAATTCAG AATTGGGATT TGATTATTTA AGAGATAATA TGGCTACTGA TATTAATGAG GTAGTTCAAA GAAAATTTAA TTACTGCGTA ATTGACGAGG TTGATTCAAT ATTAATTGAT GAAGCAAGAA CGCCTCTAAT CATTTCTGGC CAAGTTGAAA GACCACAGGA AAAATATCAA AAAGCAGCAG AATTATCTCT GGAATTGCTC AAAGCAAAAG AATTAAGTAA AGATGGTATT GATCCAGAAG GGGATTATGA AGTTGATGAA AAACAGAGAA GTTGTATATT AACTGATCAG GGTTTTGCAA AATGTGAAGA GTATTTGGGA GTTAGTGATT TATATAATCC TCAAGATCCT TGGGCGCATT ATATAACTAA CGCTTTAAAA GCAAAAGAAT TATTTATTAA AGATGTAAAT TATATTATTA AGAACGAAGA GGCCGTCATA GTAGATGAAT TTACTGGAAG GGTAATGCCA GGAAGACGTT GGAGTGATGG ACAACATCAG GCAATTGAAG CAAAAGAGAG TCTTAAAATT CAGCCTGAGA CTCAAACTTT AGCCTCCATA ACTTATCAGA ATTTTTTCCT TTTATATCCT GGTTTAGCAG GAATGACGGG GACCGCAAAA ACTGAGGAGG TTGAATTTGA AAAAACTTAT AAATTAGAAT CAACAGTTAT ACCTACAAAT CAAACAAGAA AGAGGCAAGA TTGGTCTGAT CAAGTATTCA AGACAGAGAT TGGTAAATGG AAAGCCGTTG CTAAAGAAAC TGCACAAATT CATAGAGAAG GTAGACCTGT TTTAGTTGGT ACGACAAGTG TTGAAAAAAG TGAATTATTA AGTTCACTTT TATCTGAAGA GAAAATCCCA CATAATTTAT TAAATGCTAA GCCAGAGAAC GTTGAACGTG AGGCTGAAAT TGTTGCTCAG GCAGGAAGAG CAGGAGCTGT TACTATCGCG ACTAATATGG CTGGAAGGGG AACAGATATA ATTCTTGGCG GTAATAGTGA CTATATGGCA AGGCTTAAAT TAAAAGAAAT TTTAGTTCCT TTGTTAGTCA AACCTGATAA TGAGCATAAG CCACCAATTC CTAAACAAAG AAGTTCAAAA TCTAAAGGTG GTTTTTCTAA AAAAGCTGTT ACAAATTTGA AAAAGAATAT TTCAAATTCT TCAACTAGTC TTTTCCCTTG TAAGCTCGAT GAAGCATTTG AAAAGAAACT CTCTGTTTTA TCTGATGAAC TTGTTAAAAG TTGGGGAGAC AGACAACTTT CTGTTTTGGA GCTTGATGAC AGAATAGCTA CAGCTGCAGA AAAAGCACCA ACTGATGATA ACTCGATTAA GCTTTTGAGA GAATCCTTGT CTGATGTAAA AAAAGAATAT GAAAAAGTTT TGATTCATGA AGAAGAAAAA GTAAGAGAAG CTGGCGGTTT ACATGTCATT GGTACTGAGA GACATGAATC AAGAAGAGTG GATAATCAAT TAAGAGGAAG AGCGGGAAGG CAAGGTGATC TTGGAAGTAC AAGATTCTTT TTATCTTTAG ATGATAATTT ATTAAGGATT TTTGGGGGCG ATCGAGTAGC AAATTTAATG AATGCTTTTA GGGTTGATGA AGATATGCCT ATTGAGTCAG GAATGCTTAC TAGGTCTCTA GAAAGTGCTC AAAAGAAAGT TGAAACCTAT TATTACGATA TTAGAAAACA AGTATTTGAA TATGACGAGG TAATGAATAA TCAAAGAAAA GCAGTTTATG GCGAAAGACT AAGAGTATTG AAAGGAATTG ATTTAAAGAG ACAAGTAATA GGTTATGGAG AAAGGACAAT GATTGAAATT GTAGATGCTT ATATTAATCC TGATCTTCCT CCTGAAGAAT GGAATATTGA TCAATTAATT TCTAAAGTCA AAGAATTTAT ATATTTGTTA GATGATCTTA AATCTGATGA TATTAATTTA CTATCAATAG AAGAATTAAA AAATTATCTT CAAGAGCAAT TACGAATAGC TTATGATCTA AAGGAATCAC AAATAGAAAA GATTCGTCCA GGATTGATGA GAGAAGCTGA AAGATTTTTC ATTTTGCAGC AAATCGATAA TTTATGGCGA GAACATCTTC AATCCATGGA TTCCTTGAGG GAATCAGTCG GATTGAGAGG TTATGGTCAA AAAGATCCAT TAATTGAATA TAAAAATGAA GGATATGATA TGTTTCTTGA AATGATGACT AATATGCGAA GAAATGTTAT TTATTCAATG TTTATGTTTC AACCTAAAAC TGACGTAAAT GAAAAAAATT AA
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Protein sequence | MLKLLLGDPN TRKLKRYQPI VEEINFLEEE ISQLTDDELR KETQNLKSTI SAELDLKKQK ELLEEFLPKA FAIVREASKR VLDMRHFDVQ LIGGIVLNEC QIAEMKTGEG KTLVATLPCY LNALTGKGVH VVTVNDYLAR RDAEWMGQVH RFLGLSVGLI QQDMNPLERK KNYDCDITYA TNSELGFDYL RDNMATDINE VVQRKFNYCV IDEVDSILID EARTPLIISG QVERPQEKYQ KAAELSLELL KAKELSKDGI DPEGDYEVDE KQRSCILTDQ GFAKCEEYLG VSDLYNPQDP WAHYITNALK AKELFIKDVN YIIKNEEAVI VDEFTGRVMP GRRWSDGQHQ AIEAKESLKI QPETQTLASI TYQNFFLLYP GLAGMTGTAK TEEVEFEKTY KLESTVIPTN QTRKRQDWSD QVFKTEIGKW KAVAKETAQI HREGRPVLVG TTSVEKSELL SSLLSEEKIP HNLLNAKPEN VEREAEIVAQ AGRAGAVTIA TNMAGRGTDI ILGGNSDYMA RLKLKEILVP LLVKPDNEHK PPIPKQRSSK SKGGFSKKAV TNLKKNISNS STSLFPCKLD EAFEKKLSVL SDELVKSWGD RQLSVLELDD RIATAAEKAP TDDNSIKLLR ESLSDVKKEY EKVLIHEEEK VREAGGLHVI GTERHESRRV DNQLRGRAGR QGDLGSTRFF LSLDDNLLRI FGGDRVANLM NAFRVDEDMP IESGMLTRSL ESAQKKVETY YYDIRKQVFE YDEVMNNQRK AVYGERLRVL KGIDLKRQVI GYGERTMIEI VDAYINPDLP PEEWNIDQLI SKVKEFIYLL DDLKSDDINL LSIEELKNYL QEQLRIAYDL KESQIEKIRP GLMREAERFF ILQQIDNLWR EHLQSMDSLR ESVGLRGYGQ KDPLIEYKNE GYDMFLEMMT NMRRNVIYSM FMFQPKTDVN EKN
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