| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_18171 |
|---|
| Symbol | sam1 |
|---|
| ID | 4911466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 1537826 |
|---|
| End bp | 1539244 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640161421 |
|---|
| Product | S-adenosyl-L-homocysteine hydrolase |
|---|
| Protein accession | YP_001092041 |
|---|
| Protein GI | 126697155 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
|---|
| TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATTG CAAATTCAGT TAAAACATCA ACACCGAAAT TCATCATTTC TGATATTTCA
CTATCAGATT TTGGTCGTAA AGAAATTAAA ATTGCCGAAA CTGAAATGCC AGGATTAATG
GCACTTAGAG ATAAATATCA ATCTGAAAAG CCATTGAAAG GTGCAAAAAT AGCTGGAAGC
CTTCATATGA CTATTCAGAC AGCAGTCTTA ATAGAAACTC TTGTTGATCT TGGTGCAGAA
GTGAAATGGG CTTCATGCAA TATTTTTTCA ACTCAAGATC ATGCAGCTGC AGCAATCGCA
GATCAAGGAA TTTCTGTATT TGCAAAAAAA GGTGAGACTC TGGATGAATA TTGGCAATAT
ACCCACTATA TCCTTGATTG GGGTTCAGAC TTCCCAAATA TGATTCTTGA TGATGGGGGG
GATGCAACTG GTTTATTGAT ACTAGGTAGT AAAGCAGAAA AAGATTTATC TGTTTTAGAT
AACCCGAGTA ACGAAGAAGA AATTGCTTTA TTCAACTCTA TTAAGTCTAA GTTGAAAAAT
GATGGTGAAT TCTATTCTAG AATTAAGAGT AATATCATTG GTGTCACTGA AGAAACTACA
ACTGGAGTAG CAAGACTTTA TCAACTTCAA AAGCAAAATG CTTTACCTTT CCCAGCTATA
AACGTTAATG ATTCAGTGAC AAAAAGCAAA TTTGATAATT TATATGGCTG CCGAGAATCT
TTAGTTGATA GTATCAAGCG TGCCACCGAT GTAATGATTG CTGGAAAAAC TGCATTAGTA
ATGGGTTTTG GAGATGTAGG TAAAGGTTCA GCACAGTCAT TGAGAGGACT TGGTGCCATT
GTAAAAGTTG CAGAAATTGA TCCAATTTGT GCCCTTCAAG CAGCCATGGA AGGTTACAGC
GTTGTCAGGT TAGAAGATGT TGTTGAAGAT ATAGATATAT TTGTTACGGC CACTGGTAAC
TATCAGGTAA TAACCCATGA AAATCTAGTC AAAATGAAGG ATGAGGCTAT AGTTTGCAAT
ATTGGGCATT TTGATAATGA GATTGATGTT GCCTCTTTAA AGAATTATCA ATGGGAAAAT
ATTAAGCCGC AGGTTGATCA TATAACTTTA CCGAGCGGAA ATAAAATTAT TCTTTTAGCA
GAAGGTAGAT TAGTTAACCT AGGCTGTGCA ACTGGGCATC CAAGTTTTGT TATGAGTAAT
TCGTTCACTA ACCAAGTATT AGCTCAAATT GAACTTTTTA ATAAGTCGGA GCAATATGCT
AAAGAAGTTT ATGTTCTACC AAAACATCTT GATGAAATGG TGGCCAGATT ACATTTAGAT
AAAATAGGGG CAAAATTAAC AAAATTAACT AAAGAACAGG CTGATTATAT TAGTGTTTCG
GTTGAGGGAC CATATAAATC AGAATTTTAT AGATACTAA
|
|---|
| Protein sequence | MVIANSVKTS TPKFIISDIS LSDFGRKEIK IAETEMPGLM ALRDKYQSEK PLKGAKIAGS
LHMTIQTAVL IETLVDLGAE VKWASCNIFS TQDHAAAAIA DQGISVFAKK GETLDEYWQY
THYILDWGSD FPNMILDDGG DATGLLILGS KAEKDLSVLD NPSNEEEIAL FNSIKSKLKN
DGEFYSRIKS NIIGVTEETT TGVARLYQLQ KQNALPFPAI NVNDSVTKSK FDNLYGCRES
LVDSIKRATD VMIAGKTALV MGFGDVGKGS AQSLRGLGAI VKVAEIDPIC ALQAAMEGYS
VVRLEDVVED IDIFVTATGN YQVITHENLV KMKDEAIVCN IGHFDNEIDV ASLKNYQWEN
IKPQVDHITL PSGNKIILLA EGRLVNLGCA TGHPSFVMSN SFTNQVLAQI ELFNKSEQYA
KEVYVLPKHL DEMVARLHLD KIGAKLTKLT KEQADYISVS VEGPYKSEFY RY
|
|---|
| |