Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_17641 |
Symbol | recF |
ID | 4911809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 1485558 |
End bp | 1486355 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640161364 |
Product | putative DNA repair and genetic recombination protein RecF |
Protein accession | YP_001091988 |
Protein GI | 126697102 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.674364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAC AAAGTGAAAT AAAGAACTAT ATCCGAAGTG TATGTTTCTG TTCTAATGAT ATAGATATCG TTAGAAGTGA GCCCAGTTAT CGAAGAACGT GGATTGATAA AGTCGTATCT CAGCTTGAAC CAGTATATTT AGACCTGATA AGTAGATTTA ACAGGCTTTT AAAACAAAGA AGTCATTTTT GGCGTTCAGA AAGTTTCTTA AAAACCCAAT CCACAGATAT TGTTGAAAGC TTTGATATTC AAATGTCAAT AATTAGTACA AGAATTTTTA GGCGTAGAAG AAGAGCTTTA TTAAAAATAA AACCATATGT TGAATATTGG CATAATCATC TAAGCAAATC TCAAGAGCAA ATAGACATAA ATTATCTTTC GGGGATACAA AATATAAGTC CAGAAGAAGA AGAAGAAGAA GTTATTAGTA AAAAAATAGC AGATCAACTC TTAAATCAGC GTTCAATAGA AGCATTGACT GGTAAATGTA ATTTTGGACC ACATCGTGAT GATATTGAGT TTCTAATCAA TAATGTTTCA GTTAGAAAAT ATGGTTCCTC AGGACAGCAA AGGACTTTTA TCTTGGCTTT AAAGATGGCT GAACTCGATT TATTGAATAA AACATTAAAT ATTCCTCCAA TACTGATATT GGACGATGTC TTAGCTGAAT TAGATTTAAC TAGGCAAAAT TTGTTATTAA ATTCTGTTGG TAAAGATAGT CAATGTTTTA TAAGTGCGAC ACATTTAGAT AAATTCAATC AGTCTTTCAT AGGCTCTTCA CAAATGATTC ATTTATAA
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Protein sequence | MKKQSEIKNY IRSVCFCSND IDIVRSEPSY RRTWIDKVVS QLEPVYLDLI SRFNRLLKQR SHFWRSESFL KTQSTDIVES FDIQMSIIST RIFRRRRRAL LKIKPYVEYW HNHLSKSQEQ IDINYLSGIQ NISPEEEEEE VISKKIADQL LNQRSIEALT GKCNFGPHRD DIEFLINNVS VRKYGSSGQQ RTFILALKMA ELDLLNKTLN IPPILILDDV LAELDLTRQN LLLNSVGKDS QCFISATHLD KFNQSFIGSS QMIHL
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