Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9301_17491 |
Symbol | rplC |
ID | 4912111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9301 |
Kingdom | Bacteria |
Replicon accession | NC_009091 |
Strand | - |
Start bp | 1471509 |
End bp | 1472162 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640161348 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001091973 |
Protein GI | 126697087 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATAG GAATTTTAGG AAAGAAATTG GGCATGTCCC AACTTTTCGA CGAAAAAGGT AATTCGGTGC CAGTTACTCT TATTGAGGCT GGTCCTTGCC GTATCACTCA ATTGAAAACA ACCGCTTTGG ATGGTTATAC TGCCGTTCAA ATAGGTTATG GCTTGTCCAA AGATAAGCAC ATAAGTAAGC CTGAAAAGGG ACATTTGTTG AAATCAGGTG AAGAACTTTT AAAGCATTTG AAAGAATATA GGGTTGAAGA AACTTCATCT TATGAAATCG GAAATCAAAT AACTGTAAAA AACTTTGAGG TTGGTCAAAA AGTTGATATC AGTGGTAAAT CTATGGGTAG AGGTTTTGCT GGTTACCAGA AAAGACATGG TTTTAGCAGA GGTCCAATGA GTCATGGTTC AAAAAATCAT AGAGCACCTG GATCTACAGG TGCAGGAACA ACTCCAGGCA GAATTTATCC TGGAAAAAGA ATGGCAGGAA GATATGGAGG AAAACAAATT ACTACTAAAG GTTTGTTAGT TCTAAAAATT GATGATCAGA AAAATTTGCT TGTAGTAAAG GGTTCTGTCC CAGGTAAACC AGGCTCAATA ATAAATATTA AGCCAAATAA TATTGTAGGC AAAAAAGGAG GTGAAAAATC ATGA
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Protein sequence | MSIGILGKKL GMSQLFDEKG NSVPVTLIEA GPCRITQLKT TALDGYTAVQ IGYGLSKDKH ISKPEKGHLL KSGEELLKHL KEYRVEETSS YEIGNQITVK NFEVGQKVDI SGKSMGRGFA GYQKRHGFSR GPMSHGSKNH RAPGSTGAGT TPGRIYPGKR MAGRYGGKQI TTKGLLVLKI DDQKNLLVVK GSVPGKPGSI INIKPNNIVG KKGGEKS
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