Gene P9301_14651 details

Gene Information

• Locus tag: P9301_14651
• Symbol: trmD
• ID: 4911068
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: -
• Start bp: 1232948
• End bp: 1234168
• Gene Length: 1221 bp
• Protein Length: 406 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640161057
• Product: putative bifunctional enzyme: tRNA methyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001091689
• Protein GI: 126696803
• COG category: [I] Lipid transport and metabolism; [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; [COG0336] tRNA-(guanine-N1)-methyltransferase
• TIGRFAM ID: [TIGR00088] tRNA (guanine-N1)-methyltransferase; [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGGTT TTAATTTTGA TGTAATTACA TTATTCCCTA AAGCTTTTGA ATTGATAAAT 
AATTTAGGGG TCATAACAAA AGCTCTAGAT AAGAATTTGA TCGATTTAAA TTTACATGAT 
TTGAGAGAAT ATGGAGAAGG TTCTTACAGA CAAGTAGACG ATAAGCCTTA TGGAGGAGGA 
GCAGGTATGG TATTAAAACC TGAACCTATT TATAAGGCAT ATGAATCAAT TAGAAAATTA 
CCCAAAAGTA AAACTTTGCT GATGACCCCA CAGGGTAAAG TACTAAAGCA AAAGGATCTT 
GCGAGATGGT CCACTTTGGA TCAAATAATA ATTATTTGTG GTCAATATGA AGGTTTTGAT 
GAAAGGATTA GATGTTTAGC TGATGAAGAG ATATCGATAG GCGATTATGT ACTTTCTGGA 
GGTGAAATAC CCGCTATATC AATAATTAAT GGTTTGACTA GATTATTACC AGGAACTCTT 
GGTGATCCAG ATTCCTTAGT AGATGAGAGT CATAATTCTT CTTTATTAGA ATATCCTCAA 
TACACAAGGC CGATAACTTT TAAAGATATG AAAGTGCCAG ATATTCTAGT GAGCGGTAAT 
CATGAAGAGA TTAAATCGTG GAGAAGAAGA AAAAGTTTTG AAAGAACATT GGAGAGAAGA 
AGTGACTTAA TTTCAAATGA AAACTACAAA AAATCCCCAC AAAGTAAGAG AATAATAAAA 
GAAAATAATC AATTCATGAA ATTTAGAATA GGCAATGGAT ACGATATTCA CAGACTTGTA 
GAGGATAGAG ATTTAATTAT TGGAGGTGTA AAATTACATC ACCCTGAAAG TTTAGGATTG 
GATGGGCATA GTGATGCTGA TGTTTTAAGT CACTCAATAA TGGATGCTTT ATTGGGAGCT 
CTTTCGTTGG GCGACATAGG AAAGTATTTC CCCCCATCTG ATGAAAAATG GAAAAATGCT 
GATAGCTTGT TTTTGTTATC AAAAGTAATT GACTTAATAA GACAAGATGG TTGGGAAATA 
AATAATATTG ATAGCGTTCT TGTTGCTGAA AGGCCAAAAA TCATGCCACA TATAAAACTA 
ATGAAAAAAA ATATTTCTGA AATTTTAAAT ATTGATGAAA ATTTAATTGG GATTAAAGCA 
ACTACGAATG AAAAATTGGG TCCAGAGGGG AGAGAAGAGG GTATAAGTTG CCATTCAGTA 
GTTCTTCTTG AAAAAAAATG A 

 

Protein sequence

MSGFNFDVIT LFPKAFELIN NLGVITKALD KNLIDLNLHD LREYGEGSYR QVDDKPYGGG 
AGMVLKPEPI YKAYESIRKL PKSKTLLMTP QGKVLKQKDL ARWSTLDQII IICGQYEGFD 
ERIRCLADEE ISIGDYVLSG GEIPAISIIN GLTRLLPGTL GDPDSLVDES HNSSLLEYPQ 
YTRPITFKDM KVPDILVSGN HEEIKSWRRR KSFERTLERR SDLISNENYK KSPQSKRIIK 
ENNQFMKFRI GNGYDIHRLV EDRDLIIGGV KLHHPESLGL DGHSDADVLS HSIMDALLGA 
LSLGDIGKYF PPSDEKWKNA DSLFLLSKVI DLIRQDGWEI NNIDSVLVAE RPKIMPHIKL 
MKKNISEILN IDENLIGIKA TTNEKLGPEG REEGISCHSV VLLEKK