Gene P9301_09521 details

Gene Information

• Locus tag: P9301_09521
• Symbol: dxs
• ID: 4911752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: +
• Start bp: 820286
• End bp: 822175
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640160535
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_001091176
• Protein GI: 126696290
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTTAA GTGAGTTAAG TCATCCAAAT CAACTTCATG GCTTAACAGT TTCACAATTA 
GAAGAAATTG CTTGTCAAAT TAGAGAAAGA CACCTTCAGG TAGTGTCTAC TAGTGGAGGA 
CATCTTGGTC CTGGATTAGG TGTAGTTGAG TTGACCTTGG CTTTATATCA AACTCTTGAT 
CTTGATTTTG ACAAAGTTGT TTGGGATGTA GGACATCAAG GCTACCCTCA TAAATTAATT 
ACAGGACGTT TCAGTCAATT TGATTCTCTA AGGCAACAAA ATGGAGTCGC TGGATATCTA 
AAAAGAAGTG AAAGTAAATT TGATCATTTT GGTGCTGGAC ATGCAAGTAC TTCTATTTCA 
GCTGCTTTAG GAATGGCAAT AGCAAGAGAT AGAAAAGGTG ATAATTATAA ATGTGTCGCT 
GTTATTGGAG ATGGAGCACT AACTGGAGGA ATGGCATTAG AAGCTATAAA TCATGCAGGT 
CACTTACCAA ATACCCCTTT AGTAGTTGTA TTGAACGATA ATGATATGTC TATTTCACCT 
CCGGTTGGAG CCCTTTCATC TTACTTAAAT AAGGTAAGAG TAAGTCCACC ATTACAATTT 
TTGTCCGATA GTGTTCAAGA AAGTGTAAAA AATATTCCCC TAATTGGTAA AGATATCCCA 
GAAGAGCTCA AAAATATTAA AGGAAGCGTT AGACGACTAT CTGTGCCAAA GGTTGGAGCT 
GTTTTTGAAG AACTTGGATT TACATATATG GGTCCAATTG ATGGTCATGA TATTGGTAAC 
TTAGTTAAGA CCTTTAACGC TGCCCATAAA CTTAAGAGAC CTGTACTTGT TCATGTTGTT 
ACAACAAAAG GGAAGGGTTA CCCATATGCA GAAGCCGATC AGGTTGGATA TCATGCACAG 
TCTGCATTTG ATCTTACAAC TGGGAAATCT ATTCCATCAA AGAAACCTAA ACCTGTTAGT 
TATAGTAAAA TATTTGGTCA AACCTTATTA AAAATATGTG AGCAAGATAG CAAAGTCGTT 
GGTATTACTG CTGCAATGGC TACGGGTACT GGTTTAGATA TTTTGCAAAA AAATATTCCT 
GATCAATATA TCGATGTAGG AATAGCAGAA CAACATGCAG TTACTCTTGC GGCAGGAATG 
TCTTGCGATG GTCTTAAACC TGTTGTAGCT ATTTATAGTA CTTTTCTTCA ACGTGCTTTC 
GACCAATTAA TTCATGATGT AGGGATACAA AATTTACCTG TATCATTCGT ACTTGATAGA 
GCTGGTATAG TTGGAGCTGA CGGTCCTACT CACCAAGGTC AGTACGACAT CAGTTATATG 
AGATCTATAC CTAATTTTGT ATTGATGGCT CCAAAGGATG AGTCTGAATT ACAGAGAATG 
TTAATAACTT CAATAAACCA TAATGGTCCT ACAGCTCTAA GAATACCCAG AGGCTCTGGA 
TTAGGAGTGG CTATAATGGA TGAGGGTTGG GAACCTTTGA ATATAGGCGA AGCTGAAATA 
ATTGAAGGAG GAGAAGATAT TTTAATTATT GCTTATGGTT CAATGGTTGC ATCAGCAATC 
GAAACTGCAA AGATCTTAAA AAATATGAAC ATTAATGCAT GCATTGTTAA TGCAAGATTT 
GTTAAACCTC TCGATAAAAA TCTTATTATG CCTTTAGCAA GTAGGATTCA AAAAGTTGTA 
ACAATGGAAG AAGGAACCTT AATAGGTGGA TTTGGTTCCG CAATAGTAGA ATTATTTAAC 
GATAATGAAA TAAACATTCC AGTATACAGA ATAGGTATAC CTGATGTTTT AGTTGATCAT 
GCTTCACCTG ATCAGAGTAA AGAAAAACTA GGACTTATGC CTGATCAGAT GGCAGATAAC 
ATTGTTAAGA AATTTAAGTT AGTTAATTAA 

 

Protein sequence

MLLSELSHPN QLHGLTVSQL EEIACQIRER HLQVVSTSGG HLGPGLGVVE LTLALYQTLD 
LDFDKVVWDV GHQGYPHKLI TGRFSQFDSL RQQNGVAGYL KRSESKFDHF GAGHASTSIS 
AALGMAIARD RKGDNYKCVA VIGDGALTGG MALEAINHAG HLPNTPLVVV LNDNDMSISP 
PVGALSSYLN KVRVSPPLQF LSDSVQESVK NIPLIGKDIP EELKNIKGSV RRLSVPKVGA 
VFEELGFTYM GPIDGHDIGN LVKTFNAAHK LKRPVLVHVV TTKGKGYPYA EADQVGYHAQ 
SAFDLTTGKS IPSKKPKPVS YSKIFGQTLL KICEQDSKVV GITAAMATGT GLDILQKNIP 
DQYIDVGIAE QHAVTLAAGM SCDGLKPVVA IYSTFLQRAF DQLIHDVGIQ NLPVSFVLDR 
AGIVGADGPT HQGQYDISYM RSIPNFVLMA PKDESELQRM LITSINHNGP TALRIPRGSG 
LGVAIMDEGW EPLNIGEAEI IEGGEDILII AYGSMVASAI ETAKILKNMN INACIVNARF 
VKPLDKNLIM PLASRIQKVV TMEEGTLIGG FGSAIVELFN DNEINIPVYR IGIPDVLVDH 
ASPDQSKEKL GLMPDQMADN IVKKFKLVN