Gene P9301_08221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9301_08221 
SymboltypA 
ID4911564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9301 
KingdomBacteria 
Replicon accessionNC_009091 
Strand
Start bp712663 
End bp714459 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content36% 
IMG OID640160404 
Producttyrosine binding protein 
Protein accessionYP_001091046 
Protein GI126696160 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR00485] translation elongation factor TU
[TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.848748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCTT CGATAAAAGA AATTAGAAAT GTTGCAATTA TTGCTCACGT AGATCATGGC 
AAGACAACGC TTGTAGATGC ATTGTTATCT CAATCAGGAA TATTTAGAGA CAATGAAGTT
ATCCCTACAT GTGTAATGGA TTCAAACGAT CTTGAAAGAG AAAGGGGGAT AACAATTCTC
TCAAAAAATA CTGCAGTTAA CTATAAAGAT ACCAGAATTA ATATTATAGA TACACCTGGA
CATGCTGATT TTGGAGGAGA AGTTGAGAGG GTTTTGGGAA TGGTTGATGG TTGTCTGCTT
ATTGTTGATG CAAATGAGGG ACCTATGCCT CAAACAAGAT TTGTTTTAAA AAAAGCATTA
GAAAAAGGAC TTAGGCCTAT AGTCTTTGTA AATAAAATTG ATAGACCACG AGTAGTGCCA
GAACTAGCAA TTGATAAGGT CCTTGATTTG TTTTTGGAAT TAGGAGCTGA TGATGATCAA
TGTGATTTTC CTTATCTTTT TGGGAGTGGC TTATCTGGTT TCGCAAAAGA AGAGATGGAA
TCTAATAGTG ACAATATGAT GCCTCTTTTT GAAGCTATTA TAAGACATGT TCCTCCTCCA
GTAGGTGACT CTAATAAGCC TCTTCAGCTA CAAATAACTA CCTTGGACTA TTCTGATTTC
TTGGGCAGAA TAGTAATTGG AAAGATCCAC AATGGAACTA TAAAAAATGG CCAACAGGCT
AGTTTAATTA AAGAAAACGG AAAAACTATT AAAGGTAAGG TTAGTAAGCT TTTAGGATTT
GAAGGATTAC AAAGAATTGA TATAAATGAA GCATTTGCAG GAGATATTGT TGCTGTTTCT
GGTTTTGATG ACGTCAATAT TGGTGAGACC ATAGCATGTC CCGATTCTCC TCATCCTCTC
CCATTAATCA AAGTTGATGA ACCTACCTTA AATATGACTT TTGTTGTCAA TGATTCACCA
TTCGCGGGAA AGGAAGGGAA ATTTGTTACC AGTAGACAAT TAAAAAATAG ATTGGAGAGG
GAACTTCTAA CAAATGTTGC CCTAAGAGTA GAAGAAACTG ATTCTCCTGA CAGGTTCTCA
GTTTCAGGAA GAGGAGAATT ACATCTAGGG ATATTGATTG AAACCATGAG AAGAGAGGGT
TTTGAGTTCC AAATATCACA ACCTCAAGTA ATTTTCAGAG AAATTGATAA CGTTGAATGT
GAGCCTATAG AGACTTTGGT TTTAGATGTG CCTGAAGTAT CTGTTGGTTC TTGCATCGAA
AAACTTGGAT CTAGAAAGGC AGAGATGAAA AACATGCAGA CAAGTTCAGA TGGTAGAACT
CAATTAGAAT TTCTTGTTCC ATCAAGAGGA TTAATCGGAT TTCGTGGGGA ATTTGTAAGG
ATAACCAGAG GTGAAGGCAT CATGAGCCAC TCATTTTATG AATATAAACC TAAAACAGGA
GATTTTGAAA CCAGGAGAAA CGGAGTCCTT ATAGCTTTTG AAGAAGGTGT TGCCACATTT
TATGCATTAA AGAATGCTGA AGATAGGGGA GTCTATTTCA TTAAACCTGG AGTCAAAGTT
TATAAGGGGA TGATAATTGG AGAGAATAAT CGACCGCAAG ATCTTGAGTT GAATATATGT
AAAACTAAGC AGTTGACTAA TATGAGGTCT GCAGGAGCAG AAGAACTTGA TACTTTGCAG
TCACCTGTTG ATATTACCCT TGAAAGAGCA CTCGAATATA TTGGTCCAGA TGAAATGCTA
GAGGTAACAC CAGATTCAAT AAGAATGAGA AAAATTAATA AAAAGAAAAA AAATTAA
 
Protein sequence
MSSSIKEIRN VAIIAHVDHG KTTLVDALLS QSGIFRDNEV IPTCVMDSND LERERGITIL 
SKNTAVNYKD TRINIIDTPG HADFGGEVER VLGMVDGCLL IVDANEGPMP QTRFVLKKAL
EKGLRPIVFV NKIDRPRVVP ELAIDKVLDL FLELGADDDQ CDFPYLFGSG LSGFAKEEME
SNSDNMMPLF EAIIRHVPPP VGDSNKPLQL QITTLDYSDF LGRIVIGKIH NGTIKNGQQA
SLIKENGKTI KGKVSKLLGF EGLQRIDINE AFAGDIVAVS GFDDVNIGET IACPDSPHPL
PLIKVDEPTL NMTFVVNDSP FAGKEGKFVT SRQLKNRLER ELLTNVALRV EETDSPDRFS
VSGRGELHLG ILIETMRREG FEFQISQPQV IFREIDNVEC EPIETLVLDV PEVSVGSCIE
KLGSRKAEMK NMQTSSDGRT QLEFLVPSRG LIGFRGEFVR ITRGEGIMSH SFYEYKPKTG
DFETRRNGVL IAFEEGVATF YALKNAEDRG VYFIKPGVKV YKGMIIGENN RPQDLELNIC
KTKQLTNMRS AGAEELDTLQ SPVDITLERA LEYIGPDEML EVTPDSIRMR KINKKKKN